Luidia clathrata (European starfish): 117289980
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Entry
117289980 CDS
T10152
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arun03021
]
117289980
03036 Chromosome and associated proteins [BR:
arun03036
]
117289980
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117289980
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117289980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
S1
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
S1_RRP5
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
117289980
NCBI-ProteinID:
XP_033627074
LinkDB
All DBs
Position
5:complement(12472908..12521176)
Genome browser
AA seq
1884 aa
AA seq
DB search
MADFFDSEAEVSDEDVKLSSDEEEDEEGGENENLDDLINDEEEEEDQGGSGSDEEIGIGK
KKKRKRREIDDRLEDDDYELIEENTGVKVERKKFRRVKQISDEEDSDDGEGNSASLNEAH
QRDVIAREIFQEDMEEEEEEPPEEGEIRERDPMEDQYAEIESDEEESDPDDFIVDDEGQP
LAKRKKKGHKGHRYTDAALQEAQDIFGLDFDFEEFNQYDEDYEEAGEEDSEYEDEEDEVG
DGTRRVRKAGKKRSSKKSIYDVFEPSDLERGHFTDIDSEIRATDIPERCQLRRVPVTKAG
DPELDEEAEWIYRQAFLTPPTSNQESSEQDSGYGSGYERKPPRTKNRIREALHFMRNQHF
EVPFIAFYRKEYVEPELNFNDLYKVYHWDEKWCQLKNRKENLKKLFGKMQAYQFDQISTD
DLLPDSIRPLTEADLHRLEEVDSMDKLKDVYMHFLLYYGRDIPKMHNALKRTNKKSKKRT
VQTKLIRRPVKKMVTRTIRRPKEKKPKEDGEEDEEKEEKEDKEEGEEDGEEKEKKDEDSE
SEEEVEIEEEVDTEEEVEVEVEEPEEDEETGEEGTSHQIKQATRKSMYAICQEAGLDALA
KKFGLTPEQFGENLRDNYQRYDPEQHPMEPAETAREFISSKFATEESVMKAAGYMVALQL
ANDPLVRQCVRQTYYERAKISVRPTKKGIKEIDESHPSYSCKYLKNKPVKELVGDQYLKL
LQAEEEKLLKIVMDIDLEKSSSDSYQPTPYFEEIKQLYYRDEFSHNVQEWNKERSAAIET
ALHKILYREMAKELKSKLVQEAKDGIIKLCCRKLFDWLKVMPFQVDQQMEEDEDDYLDVN
SRMGLRVMGLSFSSEMDSAAFAAVIDGDGEMVDFLRLPHFLRRKNSFYQRDRDLKQADMD
SLKEFISSKKPHVIAVGTESRTTLGVIKDIQQCVSDLEAEQQIAPISVQMIDSNVGEVYA
ATNMAETEFRKYPSLLRQAISAARRLQDPLVELARLCNPDEDLMCLKFHPMQDAVSREEL
QEALQQEFIYRVNEVGVDVNRAIAHPHTQSLVQFICGLGPRKGNAIVRTLKQQNQRLENR
NLLVTVCKLGPKVFINCAGFIRIDTTSLGDSSDSYIEVLDSTRIHPETYEWARKMAVDAL
EYDESADDANPAEALEEILENPDKLKDLDLDAFAEELERQGYGNKSITLYDIRAELNSRY
KDLRSPYHPPSAEETFSMLTKETPETFYRGKMVLCTVTGIARRRPQKDQLDQANPVRNDE
TGLWQCPFCQQDDFPELSEVWSHFDGGNCLGQAVGVRVRLDNGIQGFIPTKMISDKRVSS
PEERVKVGMTLHCRITKIEIEHFRVDLTSRSSDLQDKNAEFAPARDNFFDHNLHEKDQKK
DEDTKKKSAQAYVKRVIVHPSFHNITFKDAEKLLINMDLGEVVIRPSSKGGDHLTVTWKV
DEGIYAHIDVREEGKENVFSLGTSLWIGSEEFEDLDEIIARHIQPMAAYVRDTMQHKYYR
DTEGGKREIMEKHLGGEKRKQPSRIPYFMSFTKDYPGKLLLSYQPRSKARHEFVTITPEG
YRYRGQIHQTLNALHRWFKEHFRDPIPGVTPASVHRTPMVAAPERTPAVYSYMGTPMIQK
SGAGFNQLYATPSMSIATPRQTPGATPQINAAARYGTYSGAYSNIPSYATPQTNNPLSTP
RMTPSYQPMQTPSQNAIRTPQINPMRTPQINPMRTPQQNPGRTPQTAPGGQTPQQVAMRT
PQYQPTPKQSSWGNSTATAQQVVSAIQQQLQRTSSSRSGSAAVDWASQAAQWASRRQDHG
KSSKEPSASPANTSRRSYQPSPRSYPQPSPKSYPQPSPKSYSSSRSPKQRYPEPSPYPEP
SPMSISTTPAPSMGGDATPLFDET
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcttcgacagcgaggcagaggtgtctgatgaagatgtcaagctaagcagt
gatgaagaagaagatgaggaaggaggtgagaatgagaatctggacgatctgatcaacgat
gaggaggaagaagaagaccaaggaggatcagggtcagatgaagagatcggaattggcaag
aagaagaagcggaaacggagagaaattgatgaccggcttgaggatgacgactatgaactg
atcgaagagaatactggagttaaagttgagaggaaaaagttccggcgagtgaagcaaatc
tcggatgaggaggacagcgatgatggagagggaaactcagcttcactgaacgaggctcat
caacgagatgtcatcgctagagagatcttccaggaagacatggaggaagaagaagaggaa
ccgccggaggagggtgagattcgagagagagatccaatggaagatcagtacgcagagatc
gaatccgacgaagaagaatctgatccggatgacttcatagtcgacgatgagggccaacca
ctagcaaagaggaagaagaaaggtcataaaggtcatcgctacacagatgcggctctccaa
gaagctcaagacatctttggtttggactttgacttcgaggaattcaaccagtacgacgag
gactatgaggaagctggggaggaagactcggagtatgaggatgaagaggatgaggttggt
gatggaacgaggagagtacgcaaagctggcaagaagagatcatccaagaaaagcatctac
gatgtatttgagcccagtgatttggagagaggtcacttcactgatatcgatagtgagatc
agagcaactgatataccagaaagatgtcagcttcgccgggtaccagtcaccaaggcaggt
gaccctgagcttgacgaggaggcggagtggatctacagacaggctttcttaacacctcca
acctctaatcaggaaagctcagagcaggacagcgggtatggctcaggctatgagaggaaa
ccgccacgcaccaagaacagaatccgagaggccctgcatttcatgcgtaaccaacacttt
gaggtgccgttcattgccttctaccgtaaggaatacgtagagcccgagttgaacttcaat
gatctgtacaaggtttaccattgggatgagaagtggtgtcagctcaagaaccggaaggag
aacttgaagaagctgtttgggaagatgcaggcttatcagtttgatcagatcagtacggat
gacctcctgcctgactcaatcagacccttaacggaggcagacttacacagactcgaggag
gtagactccatggataaactgaaggacgtctacatgcacttcctcctatactacggacgg
gacatccccaagatgcacaatgccctcaagagaaccaacaagaagagtaaaaagagaact
gtccagaccaagcttatccgtcgccccgtcaagaagatggtcaccaggacgatacgccgc
cccaaggagaagaaacccaaggaggatggagaggaagatgaggaaaaagaagaaaaagag
gacaaagaggaaggggaggaggatggcgaagagaaagagaagaaggatgaggattctgaa
tctgaggaggaggttgaaatcgaagaggaggtggacactgaggaggaggttgaggtcgag
gttgaggaacctgaagaggatgaggagaccggtgaagagggtaccagtcaccagatcaag
caggccaccaggaagtctatgtacgcgatatgccaagaggctggactcgatgcccttgcc
aagaagttcggtctgacccctgagcagtttggtgagaatcttcgggataattaccaacga
tacgaccctgagcaacacccaatggagcctgctgagacagctagggaattcatatccagt
aaatttgcaacggaggagtcggtgatgaaagcagcaggttacatggtggcgctgcagcta
gccaacgacccgttagtgcgtcagtgcgtccgacagacttactacgagcgagcgaagatc
agtgtgcgtcctacaaagaaaggaatcaaggaaattgacgagtcccacccgagctacagc
tgtaaatacctgaagaacaaaccagtcaaggagctggtgggagaccagtacctgaaactc
cttcaagctgaggaagagaaactactcaagattgtcatggacattgacctggagaaaagc
agcagtgacagctaccagccgacaccctactttgaggaaatcaagcagctgtactaccga
gatgagttcagtcacaacgtccaggaatggaacaaggagaggagtgcggccattgagaca
gcactccataagatcctgtaccgggagatggctaaggagctcaagagcaaactagtgcag
gaggctaaagacggcatcatcaagctatgttgtcgtaagttgtttgactggctgaaggtg
atgccattccaagtagatcaacagatggaggaagatgaagatgactatctcgatgtgaac
agtcggatgggtctacgggtcatgggactctccttctctagtgagatggactcggctgcc
tttgccgcggtgatagacggcgatggtgagatggtagacttcctgaggttgccgcacttc
ttgaggaggaagaacagcttctaccagcgggatcgggacctgaagcaggccgacatggac
tccctgaaggaattcatctccagcaagaagcctcatgtcatcgcggttggaacagagtca
aggaccacccttggtgtgatcaaggacatccagcagtgtgtgtctgatctagaggcagag
cagcaaattgctcccattagcgtgcagatgatagactccaacgtaggggaggtgtacgct
gcaaccaacatggctgagacagagtttaggaaatacccgtccttgttgcggcaggccatc
tcagcggctcgtaggctccaggaccctctggtggagttagctcgattgtgcaatccagac
gaggatctcatgtgcctgaaatttcatcccatgcaggacgctgtgagccgagaggagctc
caggaggccctgcagcaggagttcatctacagggtcaacgaggtgggtgttgatgtcaac
cgggccattgcgcatccacacacgcagagcttggtacagttcatatgtggattgggtcca
cgcaagggcaacgccatcgtcaggacattgaaacagcagaaccagcgtcttgagaatcgt
aatctgttagtcactgtgtgtaagctgggccccaaggtcttcattaactgtgctggcttc
attagaattgacacaacctcgctaggagacagctctgattcctacatcgaggtgctagac
agcacccgtatccacccagagacctatgagtgggcccgcaagatggctgtggatgccctg
gagtatgacgagtctgctgacgatgccaacccagccgaggccctcgaggagatcctggag
aatccagacaagttgaaagatctggatctggacgctttcgctgaagagctggagagacag
gggtacggaaataagagcattactctgtacgacatccgagctgagctgaacagtcgctac
aaggatctgcggtcaccgtaccacccaccatcagctgaggaaaccttcagcatgctgacc
aaagaaacaccagagacattctacagaggtaagatggtgctgtgtacagtgactggcatt
gccaggaggagaccacagaaggatcagctagaccaggctaacccggtcaggaacgatgag
actggattgtggcagtgcccgttctgtcagcaagatgactttccggaactcagtgaggta
tggagccatttcgatggcggcaattgtctgggtcaggctgtcggggtcagagttcgtctg
gacaacgggattcagggcttcatcccgactaagatgatcagcgacaagagggtgtccagt
ccagaggaaagagtcaaggttggcatgacgctgcattgtcgcatcaccaagatcgagatt
gagcacttccgcgtggacctgacgagtcgaagctcagacctccaggacaagaacgcggag
ttcgccccggccagggacaattttttcgaccacaaccttcacgagaaggaccagaaaaag
gacgaagacacaaagaagaagtctgctcaggcgtacgtgaagcgagttattgtccatcct
tcattccacaacatcacattcaaggatgcagagaaacttctgatcaacatggatttaggt
gaagtggtcatcaggcccagcagtaagggaggagaccacctgacagtaacgtggaaggtg
gatgaaggaatctacgcccacattgatgtcagagaagaaggcaaagagaatgtctttagt
cttgggacgtcactttggatcggcagtgaggaatttgaagatcttgatgaaatcatcgct
cgtcacatccagcccatggctgcgtacgttcgcgataccatgcagcacaagtactaccga
gacactgagggcggcaaacgggaaataatggagaagcacctcggcggagaaaagcgcaaa
cagccatcgcgtatcccgtacttcatgagtttcactaaagattatccagggaaattattg
ttgtcttatcagccacgcagtaaagcaagacatgagtttgtcacgatcacacccgagggt
tatcgctaccgagggcagattcaccagacactgaatgcactccatcgatggttcaaggaa
cacttcagggaccctatacctggagtcactccagcaagtgttcatcgcactccaatggtg
gctgcaccggagagaacaccagcagtctacagttacatgggcaccccgatgatccagaaa
tctggtgcagggttcaaccaactgtacgccacacccagcatgagcatagctactccacgt
caaacccctggtgccacgccccagatcaacgcagccgcccgctatggcacgtactctggg
gcctactccaacattccgtcgtatgccacgccccagaccaataaccccctgtctacgccc
aggatgacgccctcatatcagcccatgcagactccatcacagaacgcaatacgcacccct
cagatcaacccgatgcgaacaccgcagatcaatccaatgaggacaccccagcagaatcct
ggtcgcaccccgcagactgccccagggggccagaccccccagcaggtggccatgaggacc
ccccagtaccaacctacccccaagcagagcagctggggcaacagtacagccaccgcccag
caggtcgtctctgctatacagcaacaacttcaaaggaccagctcttcaagatctggctca
gcggccgtggactgggcgagccaagctgctcagtgggcttcccgtcgacaggaccacggc
aagagtagcaaggaaccctcggccagcccagccaacacaagccgtcgctcttaccaacca
agtccaaggagctacccacaacccagtcccaagagttacccgcaaccgagtcccaagagt
tactccagcagccgtagcccgaagcagcgttacccagagcccagtccctaccccgagccc
agtcccatgtcgatctctaccactccagcgccaagtatgggcggggatgctactccactc
ttcgacgagacgtag
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integrated database retrieval system
