Luidia clathrata (European starfish): 117290274
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Entry
117290274 CDS
T10152
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03030
DNA replication
arun03410
Base excision repair
arun03420
Nucleotide excision repair
arun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117290274
03410 Base excision repair
117290274
03420 Nucleotide excision repair
117290274
03430 Mismatch repair
117290274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arun03032
]
117290274
03036 Chromosome and associated proteins [BR:
arun03036
]
117290274
03400 DNA repair and recombination proteins [BR:
arun03400
]
117290274
DNA replication proteins [BR:
arun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117290274
DNA Replication Termination Factors
ELG1-RFC complex
117290274
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117290274
DNA repair and recombination proteins [BR:
arun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117290274
Check point factors
HRAD17(Rad24)-RFC complex
117290274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_14
RuvB_N
AAA_24
AAA_assoc_2
AAA_16
ResIII
Gp44_lid
DUF815
DEAD
AAA_7
PhoH
AAA_5
AAA_19
AAA_30
Mg_chelatase
BrkDBD
Thioredoxin_6
bpMoxR
TIP49
ATPase_2
AAA_28
Motif
Other DBs
NCBI-GeneID:
117290274
NCBI-ProteinID:
XP_033627471
LinkDB
All DBs
Position
5:complement(1755398..1765786)
Genome browser
AA seq
332 aa
AA seq
DB search
MAITGAKTPANLPWVEKYRPNKLEDLISHQEIISTIQKFMNEDRLPHLLFYGPPGTGKTS
TILACAKQLYTPKEFNSMVLELNASDDRGIGIVRGPILSFASTRTIFKSGFKLVILDEAD
AMTNDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLDMKQMVPRVQH
VINEERVNVTEDGLNALVTLSKGDMRRSINILQSTSMAYDIVNEENVYQCTGHPLRSDIE
SIVDWMLNKDYTTAYNNIMKLKTLKGLALQDILTEVHIYVHRIDFPMKVRVHLLEKMADT
EHRLAAGTSEKIQLGSLLSAFQIARDMVTDEA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccataacgggagctaaaactccggcaaatctcccttgggtggagaagtacaggcca
aataagttggaagacctcatctcacatcaagaaattatctcaacaattcagaagtttatg
aatgaagatcgacttcctcatctcctcttctatggacctcctggtaccggaaagacctca
actattcttgcatgtgcgaaacagctctacacacccaaggaatttaactccatggtctta
gagttgaatgcttcagatgatcgaggtatcggtatcgttagaggtcctatcctcagcttt
gccagcacaagaacaatcttcaagtctggattcaagttagttattcttgacgaggcagat
gctatgacaaatgatgctcagaatgcactcaggagagtgattgagaagttcacagagaat
actcggttttgcttaatttgcaactatctgtccaagatcatccctgcacttcagtctcgg
tgtacaaggtttcgctttggacctctggacatgaagcaaatggtgcccagggtgcaacat
gttatcaatgaagagagagtgaatgtgactgaggatggactgaatgcactcgttacattg
tccaaaggagatatgcgtcgctcaatcaacatactacagagtacatccatggcatatgat
attgtcaatgaagagaacgtttaccagtgtacagggcacccgctgaggtcggacattgag
agcatcgtagactggatgttgaacaaagactacacaactgcatataacaacatcatgaaa
ctgaagacattgaaaggtttggcacttcaagatatactgactgaggtccacatttatgta
cacagaattgatttcccgatgaaagtacgagtacatcttcttgagaaaatggcagacaca
gagcatcgtctggctgcgggcaccagtgagaaaatccaactaggatctctactttctgca
tttcaaatcgctagagacatggtcacagatgaggcatga
DBGET
integrated database retrieval system
