Luidia clathrata (European starfish): 117290284
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Entry
117290284 CDS
T10152
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-like
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arun03009
]
117290284
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117290284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
117290284
NCBI-ProteinID:
XP_033627485
LinkDB
All DBs
Position
5:complement(4444043..4460052)
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AA seq
893 aa
AA seq
DB search
MGKKGKTGKQRKDRYYHLAKESGYRARSAFKLIQLNRKFQFLQKSRVLIDLCAAPGGWLQ
VASKNMPMSSLIVGVDLFPIRPIPHVTTLVADITTEKCRSALRKEIKTWKVDCVLHDGAP
NVGTSWVLDAFTQAQLTLWAMKLASEFLTKGGWFVTKMFRSKDYQPIMWVLQQLFKKVHA
TKPQASRAESAEIFVVCQGYIAPDKIDPRFFDPKFIFSEVAMETKQKFAILADPNKPKKV
KAEGYEEGNYTQHTVVKMSDFVATSSPVELLNSASELSFDDPAFANHTLTTKEIKHCCKD
IKVLGRKEIRILLNWQKKIAKEIAAKKEEEEKAAKEAEEEEEAKGKGAGGDGEADDEADD
SEDELEAIDKQLQEAKEEEEATNKRKRKDKVKMRKKLRERLQKAMAMSTGASQTDTTETA
SLFALQNIKNRKQLQAVNQDDSGIVDKDAQEQEDHDSEIEALMNESSDESDLPSELDSDE
AEILMEERMRNNKKKRTSSDEDDDYSDGGNSDIDPGAEDEEIDEQKKNPLMVDLDDEDPN
TKSNRRTNMWFNKSIFSGLEADEDEDFEIGQMTDNYKEQGGTIIERENGDDVDSLDEDDQ
PSSNRKASSKSVRFNTSIMSISDKGNKEKEDLPSDSSDDSDAETPNGVEVDSSDSDYDDE
VMIREMIDTKGTDQGPVEKKKKKSAKEKKAGFEVVGSDGAAVAHAQYLDPEGLALGTLMA
TSKRKRREILEQGYNRFSYGEENLPAWFVEEEVKHVKKQLPVTKDMVADYRARLKEVNAR
PIKKIAEAKARKRQRSLKRMEKLRKKAEAIGETVDISEKEKMNQIKHIYKKAKLKTKTKE
VTYIVAKKSQAAKKVKRPRGVKGHYKVVDPRMKKDVRGMKRAEARKKGKGKKR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaggggaagaccgggaaacagaggaaggataggtattaccatcttgcgaaa
gaatcaggttacagagccagatcagccttcaaattgattcagctcaatcgtaaattccag
tttctgcaaaagtctcgtgtcctcatagatttgtgtgctgctccaggaggatggcttcag
gtagcgtccaagaatatgccaatgtccagcttgattgtaggtgtggacctgttccctatt
cgacccatcccacatgttacaacactcgtggctgatataactacagagaaatgcagaagt
gcattgaggaaagaaataaaaacatggaaggttgattgcgtactccacgacggtgcaccc
aacgtgggtaccagctgggtcttggatgcattcacacaagctcaacttaccctctgggcg
atgaagcttgcctctgagttcttgacgaaaggcggctggttcgtcaccaagatgtttcgc
tccaaggactaccagcccatcatgtgggttctccagcaactattcaagaaggtgcacgcc
actaagccccaggcttcccgtgccgagtcggccgagatctttgttgtctgccaggggtac
atcgcaccggacaagatcgacccaaggtttttcgatcccaaattcatcttcagtgaagtt
gccatggagaccaaacagaagtttgccatcctcgccgacccgaacaaacccaagaaagtc
aaggcggagggctacgaagaagggaactacacacaacacaccgttgtcaaaatgtctgac
tttgtagctaccagttctccggtggaacttctcaatagtgctagcgagttatccttcgac
gaccctgccttcgccaatcacacactgaccaccaaggagatcaagcactgctgtaaggac
atcaaggtgctgggaaggaaggagattcgcatcctgctcaactggcagaagaagattgcc
aaggagattgctgccaagaaggaggaggaagagaaagcggccaaagaggccgaggaggag
gaagaggcaaaaggcaaaggagcgggaggagatggagaggctgatgatgaggctgatgac
agtgaagatgaacttgaagctatcgataaacaactacaagaagccaaggaagaagaagaa
gctactaacaagagaaaacgaaaagacaaggtgaagatgcgaaagaaactgcgagagcgt
ctgcagaaggccatggcaatgagtacaggagccagccagactgacaccacggagacagcg
tccctgtttgcgttacagaacatcaagaatagaaagcaacttcaagcagtaaatcaagat
gactccggcatcgtagacaaggacgcccaagagcaggaggatcacgactctgagatcgaa
gccctgatgaacgagtcttcggacgagagcgatctcccaagcgagctggactcagatgag
gcggagattctgatggaagagaggatgaggaataataagaagaagagaacgagcagcgac
gaggatgatgactactcagatggaggcaactcggatattgaccctggagctgaggatgaa
gaaatcgatgaacaaaagaagaaccctctgatggttgacctggatgatgaagatccaaac
actaaatcaaacagacgcacgaatatgtggttcaacaaatctatattctcagggcttgaa
gcagatgaagatgaagattttgagattggtcaaatgactgacaactacaaagaacaaggg
ggaacaataattgaaagagagaatggtgacgatgtggactccctcgatgaagacgaccag
ccctcgtctaataggaaagcctcgtccaaaagtgttcgcttcaacaccagcatcatgagc
atctccgacaagggcaacaaagaaaaggaagacctaccctcggacagcagcgacgattcg
gacgccgagacgccaaatggcgttgaggttgatagcagcgatagtgactatgacgacgag
gtgatgattcgggagatgatcgacactaaagggaccgatcagggacctgtggagaagaag
aagaaaaagagcgccaaggagaagaaggcagggtttgaggtggttgggtcggacggtgca
gcagttgcacatgcgcagtatctggaccccgagggcctcgctttaggaaccttgatggcc
acatccaagaggaaacgacgtgaaatcctggagcaaggctacaaccggttctcctacggg
gaggagaatctacccgcttggtttgttgaggaagaggtcaaacatgtcaagaagcaactt
cccgtaaccaaggacatggtggcagattatcgtgcccgtctcaaggaggtgaatgctaga
ccgatcaagaaaatagcggaagcgaaagcccgtaagcgccaacgctccctgaaaaggatg
gagaagctacggaagaaagcagaggccattggcgagactgtggacatctcggagaaggaa
aagatgaaccagatcaaacatatatacaagaaggccaagctgaaaacgaagactaaggaa
gtcacgtatatcgtcgccaagaaatcccaggctgccaagaaggtcaagcgtcctcgtggg
gtgaagggacactacaaggtcgtcgatccaagaatgaagaaagacgtcaggggcatgaag
agagcggaagcgagaaagaaaggaaaaggaaagaaaagatga
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