Luidia clathrata (European starfish): 117290435
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Entry
117290435 CDS
T10152
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03082
ATP-dependent chromatin remodeling
arun03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
arun01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117290435
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117290435
SWI/SNF complex
117290435
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117290435
PBAF complex
117290435
SWI/SNF complex
117290435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
117290435
NCBI-ProteinID:
XP_033627739
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Position
5:complement(4409044..4418592)
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AA seq
381 aa
AA seq
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MAANGEKVPIPPRTYGKKPDVFQFEEGGDKFMIGSEVGYYLRMFRGSLYKKYPSLWRKLA
TVEERKKIVTIGDRFGQHGLATNVTLLKSTEVEEILEGRDSKYRAVAISTDTNNLREAKP
KRSRDWVPAIPNSSHHLDAVPCSTSISRNRVGPKRQRTFPMCYDDHDPAIIHDNADMPET
LVPIRLDMEIEGQKLRDTFTWNKNETLITPEMFAEILCEDLDLPPVNFVQSIAQAIRTQI
DAFPADTSILEDQSDQRVILKLNIHVGNISLVDQFEWDMACKDNSPEEYALKLCADLGLG
GEFVTAIAYSIRGQLSWHQRTYAFSESPLPTVEIAVRNQGEADQWCPFLETLTDAEMEKK
IRDQDRNTRRMRRLANTAPTW
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacggtgagaaagtcccgattcctccgcgaacttacggcaaaaaacctgat
gttttccagtttgaggaaggtggagacaagttcatgatcggttctgaggttgggtactat
ctgcgcatgttccgtggctcactctacaaaaagtacccatcgctatggagaaagttggca
acagtagaagaacgcaagaaaatagtcacaataggagatcgtttcggccaacatggactt
gccaccaacgttactctcctgaagtccacagaggttgaggagatcctcgagggccgggat
tcaaagtaccgggcagtcgcaatcagcacagacaccaataacctacgagaagctaaaccc
aaacgcagcagggattgggtaccagctataccaaacagctcacatcacctggacgctgta
ccgtgctccaccagcatctctcgtaatcgagtcggtccgaaaagacaacgaacatttccc
atgtgctatgatgatcatgatccagccataatccatgacaatgcagacatgccagagaca
ctagtacccatcaggcttgatatggagattgaaggtcagaaactcagggacacctttacg
tggaataagaacgagacattaatcacgcctgagatgttcgctgaaattttatgcgaggat
ctggatctccctccagtcaactttgtacagtccatcgcccaagccatccgtacacagatt
gatgccttcccagcagacacaagtatactggaggaccaatcggatcagagagtcattttg
aagttgaacatccacgttggaaacatctccctagtggatcagtttgagtgggacatggct
tgcaaagacaacagcccggaggaatacgccctcaagctgtgcgccgacctgggtctgggc
ggtgagtttgtaacggccatcgcctacagcatcagagggcaactcagctggcatcagaga
acatatgctttcagtgaatcccccttacccactgttgagattgcggtacgtaaccaagga
gaagccgaccaatggtgccccttccttgagacgttgacagacgccgagatggagaagaag
atcagggatcaagatcgaaataccaggcgaatgcgccgtctggccaacactgctccaact
tggtga
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