Luidia clathrata (European starfish): 117290544
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Entry
117290544 CDS
T10152
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arun04121
]
117290544
Enzymes [BR:
arun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117290544
Ubiquitin system [BR:
arun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117290544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RWD
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
VPS18_RING_C
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117290544
NCBI-ProteinID:
XP_033627869
LinkDB
All DBs
Position
5:complement(4036667..4044193)
Genome browser
AA seq
789 aa
AA seq
DB search
MAASISRTKVRTVSECSEGTDSSESELLQELRLLTEIYINELNIICDDSGIASEVCVVLH
PATADNVEEQYVCLTLDMKLPEQYPDALPEITIRNSRGISDEHLMSLDAKLKQLAEERQG
GAMLYELIEVAKESLTNNNTPSCQCVICLHGFTEGDVFTKTPCYHYFHSLCLARYLKHAQ
ESEEKTVCAVCREPVTYDLSQLENAPAPSANHEAYTPDAELRKMQRRFAALYRRQKEKGG
IIDLEAESNKFLIDISQTPTLPLNTGITAVTTQPQNLHERNTKTQDVAPRQTEQGQEEAK
PPVSRNDAGHNKRSYPDRPRSSNRSNHRPGGRGSAQGRWSRGRGHTRPHSSGNKENFSKP
TDAGRRDNRPGQRSMDKGSTEHENTTDQSQISTGENMADQSDRRFDNDSICPAGITVKDH
EKHEREEQSKGRNDPHGTENERRNDASADKLDNPVCGSGETRNEGPKSGTRPIEKRRNNY
KDKINPDAKATVDPRSTEPTGRKEKPTLIDERRKKADGPDSKLSGDRTADVSVQSASIKT
DLRTKGDTSEPRNNAGRRRKAKASEENLGGDCKREQSNDVRSKSRDDRTDIRKERYHTRE
ERRPEHFNQSKDGSHQSQSAGRGNQRRPSHLNQSNDRFQNSDRRGNQSKDSSRGKGRGHP
QRSEQLSQSNNVSQSQNKGRGKLRSEYQSPINQSQGTSQSGKGCSSQSNESSHSKGSGGR
AKDKTLTDPKYETVGSDSKSKPELFKAKPNDSATSVSTKTAGFETVSDPKKDLGQRSVAP
PPGFENVKL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctccattagccgaacgaaagttcgcacagtgagcgagtgttcggaaggaacc
gattccagtgaaagtgaattgctccaggaactgagactgctaacagaaatctacatcaat
gaactgaatattatttgtgatgacagtggaattgcgagtgaagtctgtgtagtcttgcat
ccagccactgctgataatgtagaggagcagtatgtgtgtcttacgttagatatgaagtta
cctgagcagtacccagacgctctgccggaaatcaccatcaggaattccagagggatttcg
gacgaacacctcatgagtcttgatgccaagctgaagcagttagctgaggagagacagggt
ggagctatgctgtatgaactaattgaggttgccaaggagagccttaccaataacaacaca
ccgagctgtcagtgtgtgatctgcctacacggtttcacagagggtgacgtcttcaccaag
acgccctgctaccattacttccatagtctctgtctggctcgttatctcaaacacgctcag
gaaagcgaagaaaagactgtgtgtgccgtctgtcgagaaccagtgacctacgacctttcc
cagctggaaaatgctccagcccctagtgccaatcatgaagcgtacacccccgatgccgag
ttacgcaagatgcagagaaggtttgctgccctctatagacgacagaaggaaaagggcgga
atcattgaccttgaagctgagagtaataagttcctcatagatatatcccagacccctaca
ctgccgctaaatactggcatcacagcagtgacaacacagccgcaaaaccttcatgaaaga
aataccaagacgcaagatgttgccccacgtcagacggagcaggggcaggaagaggcaaaa
cctcctgtttctagaaatgacgcaggacataacaagaggagttaccccgatagaccaaga
tcgtctaataggagcaaccacagaccgggtgggcggggctccgcccaagggagatggtca
agggggaggggtcacacacgcccacattcttcgggtaataaggaaaacttttctaaacca
acagatgctggtagaagggataacaggcctggtcaaaggtcaatggataaggggtcaaca
gagcatgagaacactactgaccaatcacagattagtactggtgaaaatatggctgaccaa
tcagataggaggtttgacaatgatagcatatgtccagctggtattacggtcaaagatcat
gagaaacatgagagagaggagcaatcaaaagggagaaatgaccctcacgggacagaaaat
gaaaggagaaatgatgcatcggctgataaattggacaatccagtgtgtggttcaggtgaa
accagaaacgagggtccaaagtctgggacacgaccaattgagaagaggagaaataattac
aaagacaaaattaatccagatgcaaaagcgacggtagatccgcgttcaacagagcccacg
gggcgaaaggaaaaaccaactttgattgacgagcgtaggaagaaagcagatgggccagat
tcaaaactgtctggagatagaactgcagatgtgagtgtgcaatcagctagtattaagacc
gacctgcgaacgaagggagatacttctgagccaaggaataacgcagggcggaggcgaaaa
gcgaaagcttcagaggagaatcttggcggagattgcaagagggaacaatctaatgatgtt
agaagtaagagcagggatgatagaactgatattaggaaggagcgttatcatacgagagaa
gaacggagaccagaacatttcaaccaatccaaagatgggtctcatcaaagccaaagcgca
ggcaggggaaaccaacggagaccgtctcatctcaaccaatcaaatgacaggtttcaaaac
agtgaccgtagaggtaaccaatcaaaagattcatctcgaggtaagggcagaggtcatccg
cagagatctgaacagcttagccaatcaaataacgtgtctcaaagccaaaataagggtaga
ggtaaactgaggtctgaataccaatcgccaattaaccaatcacaaggcacgtctcaaagc
ggtaaaggttgcagcagccaatcaaatgaatcgtctcacagtaaaggcagtggaggaaga
gcaaaagacaagacacttactgatccgaagtatgagactgttggcagtgacagcaagagc
aagcccgagctctttaaagccaaacctaatgatagtgccacttccgtctcgactaaaaca
gccggctttgagacagtttcagatccaaagaaagacttgggtcagaggtcagttgcaccg
ccgcctggatttgagaatgttaagttatga
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