Luidia clathrata (European starfish): 117290669
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Entry
117290669 CDS
T10152
Name
(RefSeq) general transcription factor IIH subunit 3-like isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03022
Basal transcription factors
arun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117290669
09124 Replication and repair
03420 Nucleotide excision repair
117290669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arun03021
]
117290669
03400 DNA repair and recombination proteins [BR:
arun03400
]
117290669
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117290669
DNA repair and recombination proteins [BR:
arun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117290669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
117290669
NCBI-ProteinID:
XP_033628080
LinkDB
All DBs
Position
5:complement(34079..61626)
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AA seq
296 aa
AA seq
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MECSLVVVVVDVNPVWWGLQNGANDKGLTLFECMDHVLAFINSHVMMNQNNKVAVIASHT
NESRFLYPGREADVKADDGGREVRDGKYEHFANINDTVQEEIRKLIVENPTVGHTDTLLA
GSLAMGLCYIHRVQKACQAGQKINSRLLVIKAADDNASQYMNLMNVIFTAQKQSIPVDAC
ILEKDSGLLQQACDITNGVYLQIPQINGLLQYLLWVFLPDPSLRETLVLPPSIHVDYRAA
CFCHRTLIDIGYVCSVCLSIFCTYSPICSTCHTAFKLKTAPVLRAKKKKKTSLPAT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtagtcttgtggtggtggtggttgatgttaacccagtgtggtggggacttcaa
aatggtgcaaatgataaagggctgacattgtttgagtgtatggatcatgtactggctttt
atcaactctcatgtaatgatgaatcaaaacaacaaagttgctgttatagcaagtcacaca
aatgagagtcgctttctttatcctggaagagaggctgatgttaaagcagatgatggagga
agagaagtgcgagatgggaaatatgaacactttgctaatatcaacgacacagtgcaagag
gaaataagaaagctcattgtagaaaatcctactgtagggcatacagatacattgcttgct
ggttctcttgcaatgggactttgttatatccacagagttcaaaaagcatgccaagctgga
cagaagattaattcaaggctattggtcattaaagctgccgatgacaatgcttctcagtat
atgaatctaatgaatgttatcttcaccgcacagaaacagagcattccagttgatgcctgc
attttggagaaggactcgggcttattacaacaggcctgtgacataaccaatggtgtatac
ctccagatacctcagattaatggtcttctgcaatatctgctgtgggtattcctgcctgat
ccaagccttcgagaaactcttgtattacctccatctattcatgtggactacagagctgcc
tgcttctgccatcgtacactcatagatattggttatgtctgttcagtttgcttatcaatt
ttctgtacgtacagtcccatctgttccacttgccacactgcttttaagttgaagactgct
cctgtattaagagcaaagaagaagaagaaaacatctctgccagccacctga
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