Luidia clathrata (European starfish): 117290723
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Entry
117290723 CDS
T10152
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03030
DNA replication
arun03410
Base excision repair
arun03420
Nucleotide excision repair
arun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117290723
03410 Base excision repair
117290723
03420 Nucleotide excision repair
117290723
03430 Mismatch repair
117290723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arun03032
]
117290723
03036 Chromosome and associated proteins [BR:
arun03036
]
117290723
03400 DNA repair and recombination proteins [BR:
arun03400
]
117290723
DNA replication proteins [BR:
arun03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117290723
DNA Replication Termination Factors
ELG1-RFC complex
117290723
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117290723
DNA repair and recombination proteins [BR:
arun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117290723
Check point factors
HRAD17(Rad24)-RFC complex
117290723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
nSTAND_NTPase5
AAA_lid_RFC1
AAA_11
AAA_22
Rad17
Viral_helicase1
AAA_16
AAA_14
Mg_chelatase
RCF1-5-like_lid
nSTAND3
AAA_19
ABC_tran
AAA_assoc_2
Gp44_lid
AAA_5
RuvB_N
AAA_23
AAA_24
SLFN-g3_helicase
AAA_25
NTPase_1
MeaB
SNF2-rel_dom
PPR_long
AAA_30
AAA_28
RNA_helicase
AAA_7
MipZ
FtsK_SpoIIIE
AAA_18
CbiA
bpMoxR
PPR_1
Motif
Other DBs
NCBI-GeneID:
117290723
NCBI-ProteinID:
XP_033628150
LinkDB
All DBs
Position
5:19629251..19637317
Genome browser
AA seq
348 aa
AA seq
DB search
MSSKNPEIMEVDESTSAAAKPGKSTKYELPWVEKYRPTLLSDVVGNEETISRLEVFSKEG
NVPNVIIAGPPGTGKTTSILCLCRALLGPDYKEAVLEMNASNDRGIDVVRNKIKTFAQKK
VTLPKGRHKVIILDEADSMTSGAQQAMRRTMEIYSKTTRFALACNTSDKIIEPIQSRCAV
LRYSRLTDKQLLHRLIEVGEKEGIECTDDGLEAIIYTAQGDMRQAINNMQSTHSGFGLVN
SENVFKVCDEPHPILIKDMFTKCVEGNIDKAYEVMEHMWSMGYAPEDIISNMFRVCKTFD
MAEYLKLEFIKEIGFTHMKIAEGVGSLLQLSGLLARMCQKGMLPPEES
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaagaatccagaaataatggaggtagacgagtccacaagtgcagcagcaaaa
ccaggcaaatctaccaagtacgagctcccatgggtggagaagtacagaccaacccttttg
agtgatgtcgttggtaatgaagagacgatcagtcgactggaagttttctccaaagaggga
aatgtacccaatgtcatcatagctggtccccctggaactggcaaaaccaccagtatattg
tgtctttgccgagccttgctaggcccagactacaaggaagctgttctggaaatgaatgcc
tcaaatgacaggggaatcgatgtagtcagaaacaagataaagacattcgctcagaagaag
gttaccttgccaaaagggcgtcataaggtcatcattctggatgaagcagatagtatgaca
agtggagcccagcaggctatgcgtcgaaccatggaaatctactccaagacaacacggttt
gctctcgcctgtaacacatccgacaagatcattgagccgattcaatcacggtgtgcagtc
ttgaggtactcccgcctgacggacaaacagctcctccaccggctgattgaggttggagag
aaggaaggaatagaatgcacggatgatggactggaggcaatcatctatacagcacagggg
gacatgagacaggctataaataatatgcagtcaacacattctggttttggtcttgtgaac
agcgaaaacgtcttcaaagtttgtgatgagccccatcctatccttattaaggatatgttt
actaaatgtgttgaggggaatattgacaaagcctatgaggtgatggaacatatgtggagt
atggggtacgcccccgaggacatcatctcaaatatgttcagggtttgtaagacgtttgac
atggcagaatatcttaaactggagtttatcaaggaaattgggttcacacatatgaaaata
gcagagggagtaggttcactgctgcaactcagtggtttgcttgcaaggatgtgccagaaa
gggatgttaccccctgaggaatcatga
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integrated database retrieval system
