Luidia clathrata (European starfish): 117290850
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Entry
117290850 CDS
T10152
Name
(RefSeq) rab GTPase-binding effector protein 1-like isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117290850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117290850
Membrane trafficking [BR:
arun04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117290850
Protein recycling
Rab4 associated proteins
117290850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab5-bind
Rabaptin
FYVE
DUF5559
FYVE_2
IBR
Glyco_hydro_65C
UN_NPL4
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
117290850
NCBI-ProteinID:
XP_033628296
LinkDB
All DBs
Position
5:complement(14893008..14921789)
Genome browser
AA seq
1025 aa
AA seq
DB search
MENQVNSVHRAAGLNIEDDVNALRQRVEELETNLRSVLQERMTQEADFAQKRAKFKEIFL
TREEELIKEAELMRSERDTMQNELDELKTVAVMAETTYREEMDECRRTWKNEVGTMQAIL
RDAVAMTTEETALTYQQEREKLLAANEQLNKELQSFQQIMAEKSQMSGTDKDTSLLSSMT
RSLRSLTGSNSPSASRDEKQPQPTTVEQQPPPPQQQPSPQQKHTPTKEEEDLENSMLKAQ
KDTEILRSVVVPLEREIESLKEKLQGAKVERRALEHRLKKHGLEDLGISTVDKAQSPATP
PESVLSSTMSSADLDEKVRALSSVLEAEKTSRSDMELYVAVLNKQKYVMQEDNDTMREEL
REVCRLLEKEKQEHTNLKHTWHMANNQFLESQRLQMMDMRRMESVLTEEQQRQIVEAQRK
DREREEAEQRVQAIKEQQAKHERETERLQQSAQVEQPLISSEPQDKHGRSSSLIDLNSPT
TQLDSESTRPSHLGTRLLVNLSASAQNFTTPNVDPEELLQFETQGVYNPPGQSSSPLHRS
MNEIAAHSFSDNTMYGMDAETASLSSNISLTEAQERAISGETPEGEEMRSVLASARARTE
MFPSLAGKRVVSETEWTKLQEEIRIAREKLGRPCDMCSNYEDQLQSVQSREGEYKELTQS
LKVELDAERESVSRERRLRIELEESLQNAAEDAQSQIGNATAMNQESEKFLTDLRQQYLR
EHNEMHDRLQKLMESREQIYQEVSRLQGENESLSAKRTLHMSIMSGEEFNLPSGLDELQT
LCIKYREDIITVRVNAEHIEEKLRNENSFLKEQLEAEQHTKMTLEDTYQMEMDEYKEELR
LLRSQKDTFEKERKLCEDAQRSLQESQDGKKTIEAKSREVISALQAQVAELLQLKSKLET
EARESRNKLQSLQVELDNSEAVQRDFVRLSQSLQVQLENIRQKDNEVRWEHEEDVEQCKG
CKSPFGSQKKKKHHCMHCGKVFCPECLNHNVESGPRKRRMPVCNICHTLLVNESAPYFSK
EAPET
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaggtcaacagtgttcatcgtgcggctggcttaaatatagaagatgatgtc
aatgcactccggcaacgtgtggaagagttggagacgaatctccgtagtgttctacaggag
aggatgacccaagaggcagactttgcccagaagagggcaaagttcaaggaaatattcctg
acgagagaagaggagttgatcaaggaggcagagttaatgcggagtgagcgggataccatg
cagaacgagctggatgagctgaagacggtagccgtgatggctgagacaacgtacagggaa
gagatggatgaatgcaggagaacgtggaagaatgaggtgggcaccatgcaggctatcctt
agagatgcagttgccatgactactgaggagacggcactcacctaccaacaggaacgggag
aagcttcttgcggccaatgagcaactcaataaggaacttcagagctttcagcaaatcatg
gccgagaaaagtcagatgtctggcacagacaaggacacaagtctgttgtctagcatgaca
agatcactacgcagtctgacaggatcaaactccccatcagcatcaagggatgaaaaacag
ccacagccaacaacagtagaacaacaaccacctccaccccaacagcaaccttctccccag
cagaaacacacacctaccaaggaggaagaggacctggagaatagcatgctcaaggcacag
aaagataccgagatcttgcgctctgttgtggttcccttggagagggagattgaatccttg
aaggagaagttacagggggctaaggttgagaggagagccctggaacacaggctaaagaaa
cacggtcttgaggatctggggatctctactgtagataaagcacagagtcctgccacaccc
cctgaatcagtgcttagctctaccatgtcttctgctgacttagatgaaaaggttcgtgcg
ttgagtagtgtgttagaggcagagaaaacatcacgttctgacatggaactctacgttgct
gttctcaacaaacagaagtatgtcatgcaggaagacaacgatactatgagagaagaacta
agagaagtctgcagactcctagagaaggagaaacaagagcacactaacctgaagcacact
tggcacatggccaacaaccagttcctggagtcgcaacggctgcagatgatggacatgaga
cggatggagtcggtgctgactgaggagcagcaacggcagatcgtggaggcccagcggaag
gacagggagagggaagaggctgagcagcgggtacaggcgatcaaagagcaacaggctaag
catgaacgggagactgagagactacagcaatcggctcaggtggagcaaccactcataagc
tccgagccccaggacaaacatggccgatcctcctccctcatcgacctcaattcccctacc
actcagctggactccgagtctaccaggcctagccacctgggtacaaggttgctcgtcaac
ttgtcagcgtcggcgcagaatttcacgacgcccaacgtggatccggaggagctacttcag
tttgaaactcaaggtgtctacaatcctcctggtcagtcgagttctccacttcatcgtagt
atgaatgagatagcagcccatagcttctcagataacacgatgtatggcatggacgcagag
acagcctctttgtcatccaacattagtctgaccgaggctcaggaacgtgcaatttctggg
gaaacgccagagggtgaggagatgcgatcagttcttgccagcgccagagcgcgcaccgaa
atgttcccatcgctagcagggaagagggtcgtcagtgaaacggagtggacgaaactccaa
gaagagataaggatagcaagggagaagcttggaaggccctgtgacatgtgtagtaactat
gaagaccagctgcagagcgtccaatcacgcgagggcgagtacaaggaactcacacagagc
ctcaaagtggaattggatgccgaaagggaaagtgtctctagagagaggagattacggatt
gagctagaggaaagtctacagaatgctgcagaagatgcacagagccagatcgggaatgca
acagcaatgaaccaggagtctgagaagttcctgacagatcttagacagcagtacctaaga
gagcacaatgaaatgcatgatcggctgcaaaagttaatggaatccagagaacagatatat
caagaggtgagcagactacaaggagagaatgagagccttagtgctaagagaacgctacac
atgtccattatgagcggggaagagtttaatcttccgtcaggtctagatgagttacaaaca
ttatgcatcaagtaccgtgaggatatcatcacagtgcgcgtcaacgctgagcatattgag
gagaagttgaggaatgagaacagcttcttgaaggagcagcttgaggcagagcaacacacc
aagatgacgctagaggatacgtaccaaatggagatggatgagtacaaggaagaactcagg
ctcctgcgaagccagaaggacacttttgagaaggagcgcaaactctgtgaggatgctcag
aggagcttgcaagagtcgcaagacggcaagaagaccattgaggccaagtctagagaagtc
atctcagcactgcaggctcaggtggcagaacttctacaactcaagagcaaacttgagacg
gaggctagagagagtcgaaataaactgcaatccttgcaagtagaactggataacagtgag
gcagtacagagggactttgttcgattgtctcaatcattacaagttcagcttgagaatatc
cgacagaaagacaatgaagtaaggtgggaacacgaagaagatgtggaacaatgcaaagga
tgtaaatcaccatttggttcacagaagaagaaaaagcaccactgcatgcactgtggtaaa
gtcttctgtccagagtgtcttaaccacaacgtggagagcggtccacgcaaacgtcggatg
ccagtctgcaatatctgtcacacattactagtcaacgagtcagcgccatatttcagcaaa
gaggcacccgagacgtag
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