Luidia clathrata (European starfish): 117290916
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Entry
117290916 CDS
T10152
Name
(RefSeq) nuclear pore complex protein Nup88-like
KO
K14318
nuclear pore complex protein Nup88
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117290916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
NPIP
AAA_5
Motif
Other DBs
NCBI-GeneID:
117290916
NCBI-ProteinID:
XP_033628379
LinkDB
All DBs
Position
5:8589384..8604466
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AA seq
729 aa
AA seq
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MAAFEEGTDERISWRKSLNSHPIFDRLRETSKHVTLRSDPEELLVVREGILFAWDREQSR
LLTANLKDLLHADDASRPRSTLQILLCTHAPRFNVEHITLSLTGQHVLLWGPRGASVMHL
PRRYGKFGQYESGKETINCRTMVLAERFFMSSGSIRLLQAAWHPGSNSDLHVVLLTSDNT
LRIYDINSPHKPIQCHRLGEYSTSYSLSANRSTFEVALGDVAVAFDFGPATEDSRRALER
PSGCGPLVYPIYILKGNGDVFLLQTSLSEPGYLHTNLQGPLTMHPPAEDNYGLDACSLMC
LHSSPVVLVVATSSGILHHCVVLAGGDDDDDDDDNDSAVSESISDLASVRSKTDSSLYVY
ESVELFLTPVLSEECVEEVAYPILLHRDPSVLCKYYCSHSAGVHGVTLSWLQKLERYCSS
DNDNNEEGTVMDVINQDQPCRVAHMICTKPSETCQAAPILGLTIVDDQLLGQALLCQTVN
NDCIVTPLRNLDMPPAPLLVSEKYSQEVSSLPRQSGGEPFQHHIRKILQREVSHPILKGS
SKTSLSLKESFELVQSATRVLREEYIIKQDLARDEIEKRVKILQQQKEQQQSDLAESARL
KVEIKGKAEEIAVRHDDVVEKQKQLMKRVVSVLHTMHGQLPVLSEAEQSLQREMNEMQDK
MEQLQNALQQVRVKDEYRKEKIQEFDRKVSSPSLSQGQNRHLKTLLKEETDAIASLVKET
KNLAVAVGH
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctttgaagagggaacagacgaacgaatttcgtggcggaaaagtttgaattct
cacccaattttcgacagattgagagaaactagcaagcatgtcacactcaggagtgaccca
gaggagctgttggttgttcgggaaggaatcttgttcgcatgggacagggaacagagccga
cttttaacagcaaatctgaaagatttactccacgcagacgacgcatcacgtccgcgaagc
acgctacagatattgctgtgcacacacgcaccgagattcaacgttgagcacatcaccctg
agtctgaccggtcagcatgtcctgttatggggacctcggggggcatcggtcatgcattta
ccgagacgctatggaaagtttggccagtatgagagtgggaaggagacaattaactgcagg
acgatggtgttagctgagaggttcttcatgtccagtggttctatcaggttactgcaggca
gcatggcacccagggagtaactcagacttacacgttgtactcctcacatcagataacact
ctaaggatttacgacatcaactccccacacaagccaatccaatgccacagattaggggag
tactccactagttactccctctcggccaatcgctcaacgtttgaggtagcactcggcgac
gttgccgtggcgtttgacttcggaccggcaacagaagattcaagacgtgccctagagaga
ccctcggggtgtggcccgttggtctaccccatctacatcttgaagggtaacggagatgtt
ttcttactccaaactagtctgtccgaaccaggctatctgcacaccaatctgcaagggccc
ctgaccatgcatcccccagctgaggacaactatggactggatgcctgtagcttaatgtgc
cttcactctagtccagtggtactggtagtcgccacttccagtggtatccttcaccactgc
gtggtgctagctggtggggatgatgacgacgatgatgacgacaatgattccgcagtctcg
gaatccatatcagacctggcgagtgtccggagcaagacggattctagtctgtatgtttat
gagagcgtggagctctttctcaccccagtattgtcagaggagtgtgttgaagaagttgct
tacccaatccttctccaccgagatccatcagtcctgtgcaagtactactgctcacacagt
gctggcgtacatggtgtcacattgtcatggttgcagaagcttgagcggtactgttcctct
gacaacgacaacaatgaggaaggcacagtgatggatgtgattaatcaagaccagccatgt
agagtagcccatatgatatgtaccaagccatctgaaacatgccaagctgctccaatcctt
ggcctgactatagtggacgatcaactgcttggccaagccttgctttgccagacagtcaac
aatgactgcattgttaccccgcttagaaacctagacatgcccccagcccctcttctagta
tctgagaagtattcacaagaagtgtcgtctctgccgagacagtccgggggagagccattc
cagcatcacatccgcaagattctgcagagggaagtttcacatccgatcctcaaaggcagc
tccaagactagcctgagtctcaaggaaagctttgaactggtccagagcgccaccagggtg
cttagggaagagtacatcattaaacaagaccttgccagggatgagattgaaaaacgagtg
aagatactacagcagcagaaagagcaacagcagtcagacttggcagagagtgccagactg
aaggtagagatcaaagggaaagcagaggagatcgccgttcgccacgatgatgtagtagaa
aaacagaaacaactcatgaagagggtcgtcagtgtccttcatacaatgcatggtcagctt
ccagtattgtccgaggcagagcagagtctgcaaagagagatgaacgagatgcaagataag
atggaacaactgcagaacgccttgcaacaggtgagagtcaaagacgagtatcgcaaggag
aagatccaggagtttgaccggaaggtgtcaagtccctccctgagccaaggacagaaccgg
catcttaagacacttcttaaagaagagactgatgccattgcttcattggtgaaagaaacg
aagaacctcgcagttgcagttggacactaa
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