Luidia clathrata (European starfish): 117291107
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Entry
117291107 CDS
T10152
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04120
Ubiquitin mediated proteolysis
arun04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117291107
04120 Ubiquitin mediated proteolysis
117291107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arun04121
]
117291107
Enzymes [BR:
arun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117291107
Ubiquitin system [BR:
arun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117291107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-HC5HC2H
zf-RING_11
zf-RING-like
zf-RING_5
Rtf2
zf-ANAPC11
FANCL_C
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
117291107
NCBI-ProteinID:
XP_033628528
LinkDB
All DBs
Position
1:32366761..32384484
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AA seq
650 aa
AA seq
DB search
MRGFLLTAASFGLTASVVGHAFFQKKQFYPSVVYLTKSNPSMAVIYMQAFVMVILMGKLF
KKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPKFVAMFTFLLFLKCFHWLAE
DRVDYMERSPVISWLFHIRVIGLLGVLAALDVAFMNYAYHSTLTKGASVQLVFGFEYAIL
FTIILNISFKYILHTIDLQSENPWESKAVYMLYTDLIMSFVKVMLYTVFLAIMIKVHTFP
LFAIRPMYLAMRSFKKAVNDVIMSRRAIRNMNTLYPDATPEDLASSDNVCIICREEMVTG
CKKLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRAPVVVVTGQQNQQQQQQQQQAPAIIP
PFPGYPFWMPPYQPGANFPQQQQQQQQLQQAAAAAAAGGLPPQPPQGAAAAAPGQEGGAS
NTTPSTTQPAAGGANASAPTSPFTPSSVPPMPFMMPPPPFFMMPPFTTPPPMPPPDFAGL
TDEELRAMEGAERQHLEARIECLRGIHALLDAAMVQIQQYTSAFGEFSANVPPPPPPASL
YGFTQPTATSPVTSTTPTTLSTTEADITSTTQNADSGAIPKKTSTPSSPEPLLKKEKDSS
ADLTALDGASGFTPSTEGELIPEFKEEDGPEENDRGEIRKRRLQRLESSP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagagggtttttactcacagcggccagctttggcctaacagcatccgttgttggtcat
gctttcttccagaagaaacagttttatccctctgtggtgtatttaaccaagtcaaacccc
agcatggcggtaatttacatgcaagccttcgtcatggtgattttaatggggaaacttttc
aaaaaggtgttttttggtcaactgagagctgcagaaatggagcacctgattgagcgctcc
tggtacgcagtgacagaaacctgtttggcttttacagtattcagagatgacttcagtcct
aaatttgttgcaatgtttacatttctactcttcttaaaatgtttccattggctggcagaa
gaccgggtagattatatggaaaggagtccagttatttcttggttgtttcatattcgtgta
ataggtcttttaggtgttcttgcagccttagatgtggcatttatgaattatgcctatcat
agtacgttaactaaaggagcttctgtacagttggtgtttgggtttgagtacgcaattttg
tttaccatcattctcaacatatcattcaagtacatactgcatacaattgatcttcagagt
gagaacccatgggagagtaaagcagtctatatgctctacaccgatctcattatgagtttt
gtgaaggtcatgctttacacagtgtttcttgccattatgatcaaagtacatacgttccca
ctctttgccatccgaccaatgtatctagccatgaggtcatttaagaaagcagtgaatgat
gtgataatgtcaagacgagccattagaaacatgaacactctttatcctgatgcaacacct
gaggatctggcatcttccgacaatgtttgcatcatctgtagagaagagatggtgacaggt
tgtaagaagcttccatgtaaccacatcttccatacctcttgtctgcgctcgtggttccag
cgtcagcagacgtgtccaacatgtcgcatggatgtactcagggcacctgttgttgtggtg
acggggcagcagaatcaacagcagcagcagcaacagcagcaagcacctgcaattatacca
ccattccctggctatccattctggatgcccccttatcaacctggagccaatttccctcaa
cagcaacaacagcagcagcaacttcaacaagcagctgcagcagcagcagcgggaggatta
cctccacaaccaccccagggtgcagctgcagccgctcctggacaggagggtggtgcttct
aatacaaccccatccactacacaaccagctgcaggtggagctaatgctagtgccccaact
agccccttcacgccctcatcggtgcccccgatgcccttcatgatgccccctccgccgttc
ttcatgatgcctccatttaccacccctccccctatgccaccaccagactttgctggtctg
accgatgaggagctacgtgccatggagggtgcagagagacaacacttggaggctaggata
gagtgtctgcgtgggatccacgctctgctggatgcagccatggtgcagattcaacagtac
actagtgcctttggggagttcagtgcgaacgtccctccaccacccccacctgccagtctc
tatggcttcacccaacctactgcaacctcccctgtaacaagcacaacacccacaacccta
tccacaactgaagcagacattacaagtacgacacaaaatgcagattcaggggccatccct
aaaaagacatctacaccatcaagcccagaaccactcttaaagaaagaaaaagactcctca
gctgacctgacagcattggacggtgcctctggcttcacgccctccaccgagggagaactt
atcccagaatttaaggaggaagatggaccagaggaaaatgaccgtggtgaaattaggaaa
cggagattacaacgtcttgaaagttccccgtga
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