KEGG   Luidia clathrata (European starfish): 117291137
Entry
117291137         CDS       T10152                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun04137  Mitophagy - animal
arun04144  Endocytosis
arun04145  Phagosome
arun04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:arun00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117291137
   04145 Phagosome
    117291137
   04137 Mitophagy - animal
    117291137
   04148 Efferocytosis
    117291137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:arun04131]
    117291137
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:arun04147]
    117291137
   04031 GTP-binding proteins [BR:arun04031]
    117291137
Membrane trafficking [BR:arun04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117291137
 Endosome - Lysosome transport
    117291137
Exosome [BR:arun04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117291137
  Exosomal proteins of other body fluids (saliva and urine)
   117291137
  Exosomal proteins of colorectal cancer cells
   117291137
  Exosomal proteins of melanoma cells
   117291137
GTP-binding proteins [BR:arun04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117291137
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 117291137
NCBI-ProteinID: XP_033628572
LinkDB
Position
6:520729..543799
AA seq 217 aa
MAARGGGAQRPNGVQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQR
QASPNIVIALAGNKADLANKRMVEYEEAHAYAEENSLLFMETSAKTAMNVNDIFLAIAKK
LPKSEQGAGAGSSQRQAGRGGVDLTENQQPSSGGCCK
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcagcaagaggcggtggagcacagagaccaaatggtgtccaagggaagatttgtcag
ttcaagctagtgttattgggcgagtcggcagtgggcaaatccagcttagtcctacgattc
gtcaagggtcagtttcatgaataccaagagagtaccataggagccgcgtttctgacacag
actgtctgcttagatgatacaacagttaaatttgaaatatgggacacagcgggtcaggag
agataccacagcctggcaccaatgtactacagaggagcgcaagcagccattgttgtctat
gacattacaaaccaagacacatttgcacgagcaaagacatgggtaaaagagctacagcga
caagcaagtcccaacatagtcatagcattagctggtaacaaagcagacttggctaacaag
aggatggtagagtacgaggaagcacatgcatatgcagaagagaacagtttgttgttcatg
gaaacgtcagctaaaacagcgatgaacgtaaacgacatattcttggcaatagccaaaaag
cttccgaagagcgaacaaggtgccggagctggctcatcccaacggcaagcaggcagagga
ggagttgatcttacagaaaaccaacaaccatcatcggggggttgttgcaaatga

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