Luidia clathrata (European starfish): 117291640
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Entry
117291640 CDS
T10152
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117291640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117291640
Membrane trafficking [BR:
arun04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117291640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_VPS8_2
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
zf_RING_Vps8_fungal
WD40_CDC20-Fz
Beta-prop_HPS5
zf-RING_11
zf-RING_UBOX
Beta-prop_WDR3_1st
TPR_LAA1_C
Beta-prop_WDR5
Beta-prop_NWD2_C
zf-RING_5
EIF3I
Beta-prop_THOC3
PHD_NSD
zf-RING_2
MlaC
zf-rbx1
Prok-RING_1
PI3Ka
PHD
WD40_Prp19
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
117291640
NCBI-ProteinID:
XP_033629373
LinkDB
All DBs
Position
6:complement(13928209..13967740)
Genome browser
AA seq
1425 aa
AA seq
DB search
MSEVNSADDDGVALTGLASASAAAMNLDVDLSLDDVTIDDDEFDIPELDSAPTLDSILNE
NDEPFDIDAQSLSLYGQTSDGSAPVSEPNTPSRSPHKYGRKKSVQYPNHGSIIRHVVLKN
ISSQLMSASDRVQAGSPSAMAISQYIAVGTSHGLILVFDPNQVLKWCLGSTALGTQYGAV
STLGINNDCSRLLAGFARGQITMWDLTSGKLLRTITDAHPPGSAVLHIQFSDDPTMAICS
DSGGSVFELSFKRVMGMRTCESRCLFSGSRGEMATIAPLHVHSTIKEHPMKEMAILAMAT
LSKVFIVSVRPKLTVIFTKQLKGDPSTLPLLAWQFVVIQGKNTDRVVDPVLAFARTNMVY
FYQVLYSEDGLVKVVPLQSIKLPYNLIALHWFNPKTLVAIDTTERLHLVDVRTEEELEVV
DLVDIELVYGSSFFKSLATGGNVSQAMALAGERACYQSISSYKGQLVILGTKSLHVMTTR
AWSERLDILEKEDKYKAALALALSFYNGKAKAVVGLFGNTEDRGKTVGEKILELLFTYVD
VSMKHGPVRGAIHLLEEHFQKVVPVCVDYCQTLDRRDILFGPIYDRFQQDSIAKGVFLEC
LEPYILNDTLTSITPGVMKDFVDHYKTKEMVHSVEACIVHMDIASLDIHQVVSLCWAHGL
YDAIIYVYNKGMNDHITPLEDLLQVLGQAVTSGKQLTDQQIKLGNKLLVYISCCLAGRAY
PLGDIPSDLIKSVKEGVWKCLTSLHTKQANEEEHVYPYLRTLLHFDTREFLNVLALAFEE
PEFASQGSSYAAGLQSKQRIVDILLQVMVESIGFSPSQVGCLFTFLARQMAKNDNNIVVN
RLLFEQVVEFLSNPADETRHEEREQALLQLVNAGGLEQVDQQKLLRLAEGAKFYRVSELL
YEKRRQFDRILLCYLRDPARKHAVFTYINNVMMESCYTDPEKDAVQSEALENLQDLVAID
SKETAQLVLKVFANSLDEVIDKLHDRLKLQYEFLQGVFDYRDATSTALGPKEQSQSDPAI
HEKYIDLMCQFNPSAVHHYIRNVEGYRLEETLQIVRRRKIADATAYLLEMAGDIQGAFRI
MLESLSSSIRILSDTMQSDKMADNTKDPSVAICGMQAGLMVIIQLCQRNSAKLDEPEREA
LWFPLLDLMMASQRKLKSSLGDDHFEAFKDLTRHVLNSMMGYIALPAVLQKIMQDPTYST
GKFGEIKELILGMLDTYNYEKTLLRTTNNLLDHDLYWSLNNLTQAVSRGLIPRKESCFIC
HRNFTKIGEDEAVVVFSCGHTYHTQCLHTSGCSSMIEGKQHWTCYQCYSTRRTGKGRLLN
VRKSEHFASVAGEKGMVERGSVKKSGAAVAGASGKNESVQMDPEQLAALELLKKRLEGPS
RLAVLCEVTRAYRDQPSSASGYVRADSMLLSDSFKLRLAPPPSEN
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtaaattctgctgatgatgatggagtagctttaaccggattggcgagtgct
tctgctgcagcaatgaatctagatgttgatttgtcacttgatgatgttacgattgatgat
gatgagtttgacattccagagttggattcagctccaacattagacagtatcttgaatgag
aatgatgagccgtttgatattgatgcacagtctctgagtctctatggtcaaaccagcgat
ggttcagccccagtatctgaacccaacacaccgagcaggtcacctcataaatatgggagg
aaaaagagtgtacagtatccgaaccatggttctatcatccgacatgttgtactcaagaat
atctcatcccagctcatgtctgcatcagatcgtgtacaagcaggaagtccgtcagccatg
gcaatctctcagtacatagcagtaggaacctcacatggccttattcttgtctttgatcca
aatcaagtgttaaaatggtgtcttgggagtacagcactaggaactcagtatggtgcagta
tcaacattgggtatcaacaatgattgtagtcgacttctggctgggtttgctagaggacag
atcaccatgtgggatttaactagtggcaagcttctacgcaccatcacagatgcccatccc
ccaggttctgcagtccttcatattcagttcagcgatgatcccacgatggcgatctgcagc
gacagcggtggttctgtatttgagctgagcttcaaacgggtcatgggaatgagaacgtgt
gaatccagatgtctcttctctggcagtcgtggagagatggcgaccatagcaccccttcat
gttcacagtacaatcaaggaacatcctatgaaggaaatggccatcctagccatggcaaca
ctctctaaggtttttattgtcagtgttcggccgaagctgactgtgatattcacaaaacaa
ctcaagggtgatccgtccacgctacctctcctggcatggcagtttgtcgtcatccaggga
aaaaacactgatcgggttgtggatccagtgctggcattcgcaaggactaacatggtctac
ttttaccaggttttgtacagtgaagatggactagtgaaagttgttcctctccagtcaata
aagcttccatacaacctgattgcccttcattggttcaatcccaagacgttggttgccata
gataccactgaacgtctgcaccttgtagacgtgaggacggaggaggaattagaggtcgtt
gacctggtggacattgaactggtgtacggcagtagttttttcaagtccttagctacgggg
ggaaacgttagccaagcaatggctcttgcaggtgagcgtgcttgctatcaatccatctca
tcctacaaaggacaacttgtcattctcggaacaaagtctctacacgttatgacaaccaga
gcatggagtgagaggctcgatatcttggagaaggaagacaagtacaaggctgccctggca
ctggcgttgtctttctacaacgggaaagcaaaggcagttgtgggtttgtttggaaataca
gaggacagaggtaaaacagtgggtgaaaagattttggagctgctgttcacttatgtcgat
gtctccatgaagcatggacctgtcaggggggcaatccacttgctggaagagcattttcag
aaagttgtcccagtatgtgtggattactgccaaacacttgacagaagggatattttattt
ggaccgatctacgaccgtttccagcaggacagcatagctaaaggcgtctttctggaatgc
cttgagccttacatcctcaacgatacgctgacgtccatcactccaggcgtcatgaaagat
tttgtggaccactataagaccaaggagatggttcatagtgttgaagcttgtattgtacac
atggatatcgcaagcttggatattcaccaggtggtgtcactctgctgggcccatggtctg
tatgacgccattatttatgtgtacaataaagggatgaacgatcacatcactccgttagag
gatctacttcaagtcttggggcaggctgtgacttcggggaaacaactgactgaccagcag
atcaagcttggcaacaaactgcttgtatatataagttgctgcttagccgggcgtgcctat
ccactgggtgacattccttcagatctcatcaaatcagtcaaagaaggggtctggaagtgt
cttacgtcccttcacactaagcaagccaatgaggaggagcatgtctacccttacctcagg
acgttgcttcattttgacaccagggagtttcttaacgttcttgcactcgccttcgaggaa
ccagagtttgcctctcagggaagttcgtacgcagcaggtcttcaatccaagcagcgtatt
gtcgacatcttactccaagtcatggtagagagcatcggcttctcaccgtctcaggttgga
tgtctgtttacattcttagcgagacagatggccaagaatgataacaacatcgtcgtcaat
cgactcctctttgaacaggttgttgagtttctctccaatccggctgacgagacacgtcac
gaggagagagagcaagctttgctgcaacttgttaacgctggaggacttgaacaagtcgat
caacagaagcttcttcgactggcagagggcgctaaattttatcgtgtgagcgagcttttg
tatgagaaaagacgtcagtttgataggattctactctgctacctcagggatccagctagg
aagcatgctgtctttacctacatcaacaacgtgatgatggagagctgttatacagaccct
gagaaggacgctgtgcagagtgaagccctcgaaaacctccaggatttagtagccattgac
agcaaagagacagcccagttagtcctcaaggtgtttgccaactctctggatgaggtaata
gacaaacttcatgaccggttaaagctacagtatgaattcctgcagggtgtctttgattat
cgggacgcaacaagtacagccctcggaccaaaggagcagtcacagtccgaccccgccatt
catgagaagtacattgacctaatgtgccagttcaaccctagtgccgtccatcattacatc
aggaacgtagagggatatcgccttgaggagactctgcagattgtgagacgtcgcaagata
gcagatgccacagcttaccttctcgagatggctggtgatatacaaggagctttcaggatt
atgctggagagtttgtccagtagtatacgcatcctgtcggatacaatgcagtcagacaaa
atggccgataacactaaagatccgagtgttgccatctgtggcatgcaggctggcttaatg
gtcattattcaactgtgtcagcgaaactctgctaagctagatgaaccagagagagaggct
ctgtggtttccgttactggatctgatgatggcttcacagaggaaactcaaatcatccctc
ggagacgaccattttgaggcgttcaaggacctgacgagacatgtgttaaatagtatgatg
ggatatattgctctgccggccgtcttacagaaaatcatgcaggacccgacttacagcacg
gggaagtttggtgagatcaaggaactgatacttgggatgctggacacctacaactacgag
aagacgctactaaggaccaccaacaatctcctggaccatgacctctattggtcgctgaat
aacttgactcaagcagtcagtcgtggtttgatccctcgtaaggaatcgtgcttcatctgt
catcgtaacttcactaagattggagaggatgaagcagtcgtcgtcttcagctgcggtcat
acctaccacacccagtgcctgcatacctcaggttgctcctccatgatagaagggaaacaa
cactggacatgctaccagtgttacagcaccagacggacgggcaaaggcaggctactcaac
gttaggaaatcagaacactttgccagcgtggctggggagaaaggaatggtggagaggggc
tcggttaagaagagcggagctgccgtggcaggagccagtgggaaaaatgagagtgtacag
atggacccagagcaactagcagcgttggagttactcaagaagagactagaaggcccatct
aggctcgcggtgttgtgtgaggtcactagagcgtatcgtgatcagccatcgtcagccagt
ggctacgtccgagcagacagcatgctcctatcagatagcttcaaactccggctagccccg
cctccttcagagaattga
DBGET
integrated database retrieval system
