Luidia clathrata (European starfish): 117291728
Help
Entry
117291728 CDS
T10152
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03018
RNA degradation
arun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117291728
09123 Folding, sorting and degradation
03018 RNA degradation
117291728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117291728
03041 Spliceosome [BR:
arun03041
]
117291728
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117291728
mRNA degradation factors
5'-3' decay
Lsm complex
117291728
Spliceosome [BR:
arun03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117291728
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
117291728
NCBI-ProteinID:
XP_033629486
LinkDB
All DBs
Position
6
Genome browser
AA seq
92 aa
AA seq
DB search
MAAATTTTNQSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVVEFEL
TAEGRRVTKLDQILLNGNNITMLIPGSEGPEV
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgccacaacaaccacgaatcaatcgcaactcttgccgcttgagctggttgat
aaatgcattggatccagaatacacatcgtgatgaagagtgacaaggagattgtcggtact
ctccttggatttgatgactttgtcaacatggtcttggaagatgttgttgaatttgagttg
acagctgaggggaggagagtaaccaaactagaccagattcttctgaatggaaataacatc
accatgttaatccctggaagtgaaggcccagaagtatag
DBGET
integrated database retrieval system
