Luidia clathrata (European starfish): 117291746
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Entry
117291746 CDS
T10152
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117291746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arun03021
]
117291746
03036 Chromosome and associated proteins [BR:
arun03036
]
117291746
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117291746
Coactivators
SAGA/TFTC/STAGA complex
117291746
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117291746
STAGA complex
117291746
TFTC complex
117291746
SAGA complex
117291746
SLIK complex
117291746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR41
WD40_like
Beta-prop_SPT8
Beta-prop_WDR19_1st
Tricorn_2nd
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_ELP1_1st
Beta-prop_IP5PC_F
Beta-prop_NWD2_C
Ge1_WD40
eIF2A
LisH_PAC1
Beta-prop_ACSF4
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
117291746
NCBI-ProteinID:
XP_033629526
LinkDB
All DBs
Position
6:complement(9475238..9495064)
Genome browser
AA seq
647 aa
AA seq
DB search
MDKQTLAAVLQFLRKNNLAETEELLKKEANVEDTDEGVGTSTDQDVSSVLSAYNSDGDPC
LYEEFYRGLQNLVESSLDSSKSELSQVLYPVFIHMYLELVYNGHENQAKKFFAAFSEDQE
EHHQEDLTQLATVAKKEHMIHNELMMNYRTSKYVIRMCRNSYQTLKKQLNDKQITMVLII
VEEHLFIDVFDGVPRNKQQIEATAGGMVGEARRDANKGRVYYGLLKEPEIALPIEEDEEG
GEEGDKPKRKRPKKDSSASKKNKPDPNAPPANRIPLLDLKDSDKIDRAIALRELSKRIRL
GPDCLPSICFYTFLNAYQGLISVDISDDSSLMVAGFADSCIRVWALTQRKLRNMKSGSDL
ALIDKEADDIMERIMDDRTSSDCRTLHGHSGSVYSVSISPDRTYIVSGSEDGTVRVWSLY
TFTNLVCYKGHNYPVWDVQFGPYGHYFVSGGKDRTARLWSTENYQPLRLLAGHFSDIDCV
KFHPNSNYVATGSSDRTIRLWDVQNGKCVRIMTGHKGQIQILCFSPNGHYLASGGADARV
LIWELRHGHLVAELTEHTDTVYALAFCRDGSVLASGGIDHCIKLWDAKKVATEVEAEDMT
TTPHIVQSEKSKLLLGSYPTKATAVHYLHFTRRNLLLAAGSYTTVSS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacaaactctagcagccgttctacagtttttacggaaaaacaacttagcggaa
accgaggagttactcaagaaggaagctaacgtagaggataccgatgaaggagtgggtacc
agtactgatcaagatgtctcctcagttttatccgcctataacagcgatggggatccttgc
ctatatgaagaattttaccgcggtttacagaaccttgtagaatcctcacttgactccagc
aagagtgaactttcccaggtcttgtatcctgtcttcattcatatgtatttggagcttgtc
tacaatggccatgaaaaccaagccaagaaattctttgctgccttcagtgaggaccaggag
gaacatcatcaagaagatctgactcaacttgcaactgtagccaagaaagagcatatgata
cacaatgaactcatgatgaattacaggaccagtaagtacgtgattcggatgtgtagaaac
tcctaccaaacattgaagaaacaactgaatgataaacagattactatggtactcattata
gtagaggaacatctctttattgatgtttttgatggagttccacggaacaagcagcaaata
gaggctactgcaggaggcatggttggagaagcgagaagagatgccaataaaggaagggtt
tattacggcttactgaaagaacccgagatcgctcttcctatagaagaagacgaagaagga
ggagaggagggagataaaccaaagagaaagagacctaagaaagattcaagtgccagcaag
aagaacaaaccagatccaaacgccccaccggccaacagaatacctcttcttgatttgaaa
gactcagacaagattgaccgtgctattgctctgagggagttatccaaaaggataagactt
ggccccgactgcctgccatccatctgcttctacacgttcctcaatgcataccaaggttta
atatccgtagatatcagtgatgactctagtctgatggtggctggttttgctgattcttgt
atccgtgtctgggcattgacccagaggaaactacgtaatatgaagtctggtagtgatctt
gctctaattgacaaggaggctgatgacatcatggagaggattatggatgataggacatca
tcagattgtcgtacattacacggtcacagcggttcagtctattcagttagtattagccct
gatagaacctacattgtatcagggtctgaagatggtactgtcagggtgtggagtctgtac
acatttactaatctagtctgttataaaggacacaactaccccgtctgggacgtccagttt
ggcccatatggtcattactttgtgtctggtggtaaggataggacagcaaggctttggtca
acagaaaactaccaaccactccgtttacttgcaggtcacttctcagatatagattgtgtt
aaatttcatcccaactccaactacgttgctactggttcaagcgataggactattcgttta
tgggacgtacagaatggaaagtgcgttcgaatcatgactggacacaaggggcagatacag
atcctgtgtttctctccgaatggtcactatcttgcttcaggaggtgccgatgctagagtt
ctgatatgggagctaagacatggtcacctagtagctgaacttactgaacatacagacact
gtctacgctctggcattctgcagggatggtagcgtacttgcatcaggtggtattgatcac
tgcataaagctatgggatgctaagaaagtagctacagaagtagaggctgaagacatgacc
acaacacctcatatagtacaatcagaaaagagtaagttgttactgggttcttatccaacc
aaggccacagctgtacactatcttcactttacaagacggaacttactcctggctgctggt
tcttatacaactgtctccagttaa
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