Luidia clathrata (European starfish): 117292160
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Entry
117292160 CDS
T10152
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arun03021
]
117292160
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117292160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
117292160
NCBI-ProteinID:
XP_033629993
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Position
1:complement(16007992..16020162)
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AA seq
574 aa
AA seq
DB search
MAPMPPMPPTIQSGEKRSDRDRKSTRGTVPGKSDLVCRIKYSNNLPDIPFDPKFVTYPFE
ANRFVQYNATSLERNYKHELLAEHDLGVTIDLINPDTYKIDANTYLDPADEKLLEEEIAT
PGDSKRSRQHTKAVSWLRKTEYISSEYNRSQYSRDKVETKVAYHLKKQFNEEDLYKDQAS
QIAAIEKTFEDAKRPIEQHYSKPHVKPVEILPAFPDFDMWIHPCAQVIFDSDPAVRGKSV
HAQVEEMSQAMIRGMVDEAGDQFVGYFLPNEETSRKRKRDFADEINYVEDEEYDYDLERE
YNWNVKNKASRGYEENYFFVFRSGKGVYYNELETRVRLNKRRAKEKEGPPSKSILIVKHR
ELTDQEVIVQDARLSQLDNVIHEEEEEEEEEEVAVEEGTEEAEEKDENEDEMETQAEGGE
EMEVEEEETREDSGEEEEAQDSDAEKAVSGSGSEKAESEVEKEGSDAEEEEVQERGEDEQ
EEEDEEMQEHNEEEEEEVARSGSEKEDEQEEEAGSGNEEVEDEEEEKEEAEEEEEEEEEE
EEEQRGVERDEEEIFGSDSDAESGQASSAEEDSD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcacccatgccacccatgccaccgacgatccaaagtggtgaaaagagaagtgatcgg
gacagaaagtcaacaaggggtacagtaccaggaaaatctgacctggtgtgtcgcatcaag
tacagcaacaatctcccagatattccattcgatcccaagtttgtaacgtatccgtttgag
gccaatcgcttcgtccagtacaatgccacgtcgttggaacgtaactacaaacatgaacta
ctggcggagcatgacctcggggtcaccattgatcttatcaatccagacacttacaaaata
gacgcaaatacttatttagaccctgctgatgagaaattactagaggaagaaattgcaaca
ccgggagattccaaacggtctcgtcagcataccaaggcagtatcatggttgaggaagaca
gagtacatctccagtgaatacaacagatcccagtatagcagagacaaagtagaaacaaag
gttgcatatcacttgaagaaacagttcaatgaggaagatttatacaaggaccaagcaagt
caaatcgctgcaatcgagaaaacatttgaagatgccaagcgaccaatcgagcagcattac
agcaaaccacatgtcaagccagtggaaatcctcccagcatttcccgactttgatatgtgg
atccatccgtgtgctcaggtgatctttgattcagatccagcagttagaggaaagtctgtc
catgctcaggttgaggagatgtcacaagctatgatcaggggtatggttgacgaggcaggg
gaccagtttgtcggctattttctcccgaatgaagagacgtcaaggaagagaaagagagat
tttgcggatgagataaactacgtcgaagatgaagagtatgactacgatctggagagggaa
tataactggaatgtgaagaacaaagcaagccgaggttacgaggagaattacttctttgta
tttaggagcggcaagggtgtctactacaacgagctggaaacaagagtgcgactcaacaaa
agaagagctaaagagaaagagggtccaccttcgaagtcgatcctcatagttaaacaccga
gagctcactgatcaggaagtgattgttcaagatgcaaggttatcccagttggataatgtc
attcacgaagaagaagaagaagaagaagaggaggaagtggcagtagaagaaggtaccgag
gaagctgaagaaaaggatgagaatgaagacgagatggagacacaagcagaaggtggtgag
gagatggaggtcgaggaagaagaaaccagagaagatagtggagaggaggaggaggcccaa
gattcagatgctgaaaaggcagtcagtgggagtgggagtgagaaggcagagagtgaggtt
gagaaggaaggcagtgatgcagaggaggaggaggttcaagaaagaggtgaagacgaacaa
gaagaagaagatgaagaaatgcaagagcacaatgaggaagaagaggaggaggtggccagg
agtggaagtgagaaagaagacgaacaagaagaagaagcaggaagtggcaatgaagaggtc
gaagatgaagaagaggagaaagaagaagcagaagaggaagaagaggaggaggaggaagag
gaggaggaacaacgaggcgttgagagggacgaggaggaaatctttgggagtgatagcgat
gctgaatccgggcaggcatctagtgctgaggaagatagtgattga
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