Luidia clathrata (European starfish): 117292208
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Entry
117292208 CDS
T10152
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03420
Nucleotide excision repair
Brite
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117292208
DNA repair and recombination proteins [BR:
arun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
117292208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
117292208
NCBI-ProteinID:
XP_033630062
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Position
7:18068584..18087009
Genome browser
AA seq
1488 aa
AA seq
DB search
MATPMSAAKNENGDQTQSTAAAPGLALPENGQETTDVLPPTTTSDIPQTDTQSSGVDPST
PSASACLKNLAGNIDQNGASTSSKDEASTSTGGVFSINRDLIPSVPNQMQATELQGLEGV
SVFDQEEFEKGVLEQVDQAISARQQVVDRERAEKDLNAVLVDIRSCKKDLGHITKVMSNM
NSKTIPLTFAQKEVQRNLISMRTKRDNKAKQLKTLRARQRSLLTKLSGSDVNLQVSDDEE
EGQDQNVQTYQQLLCRSPTSEGIPTQPAKETEQERLIRLGEMTPFGSMVQSKASTSKKNL
HPQPMTDFEKYMTQKTQDDMTRRKKVTPRKPTPMKSKSEPIKTQSSQPTHKIAPVQQDVK
QKQKELSKKLKQKSTKKPTKETKKKTTDSSDDETYFVYKPVRSETSASFPKSRKRTKKTQ
DLKPHWGSDAELSDWDNDGNNSEQSDEDYTPGFNDLSDEDEERFTPKKKSKKRGRKESIS
TEDFEDGTIACLDDLKKSYGVKVQRSKSGHRKFKCKDDATQDLYFRRLKENRRSELVKKQ
RMIERGEVDSDSEPEEMQFEGGLIIPGKIWCNLYKYQKVGVKWLWELHQQQAGGIIGDEM
GLGKTIQMIAFLAGLRGSKLRNPGSRYIGLGPVLIVCPATVMHQWVKEFHKWYPEMRVAI
LHDSGSHTGSKRALIHDIALCHGTLVTSYSAVRIQEKLLLQHTWHYIVLDEGHKIRNPDA
AVTQACKQFRTCHRLILSGSPMQNNLRELWSLIDFVFPGKLGTLPVFMEKFSVPITIGGY
SNATQVQVQTAYKCASVLRDTINPYLLRRLKADVKQNLNLPSKSEQVLFCRLSEEQIQIY
KDYLNSKECQLILNREYQVFAGLITLRKICNHPDLVSGGPRIIKGDTSLEAVQAANDPAM
QYGYWQRSGKMIVINSLLKLWSKQNHRVLLFSQSKQMLDIIEDFVKKTYTYMRMDGTTPI
SSRQPLIQQYNNDPSIFVFLLTTRVGGLGVNLTGANRVVIFDPDWNPSTDTQARERAWRI
GQTRQVTIYRLITAGAIEEKIYHRQIFKQFLTNRVLKDPRQRRFFKSNDLFELFTLTSDS
NQHGTETSAIFAGVGSDVKVPTTAHRPARKKSIERRVKTELQGRKERNGVRRMENHDSKM
ETGEVKSEIQNGVSPEDIPGCSRSAENGVESEAGITSRSNGRQSLDVEMGDQAGTSKGEK
SNAERKRRKKKKDARLDGHRIAHLAKHTAYQPKSEHGEPKDEQSDAQKDDYVLSKLFKKS
GVHSALQHDNIMEAASPDYLLVEGEAERVARDAVKALKDSRRHCHRATSGLPTWTGSGAS
GGTTTPPKKPRFGQKSNNKVAGLLGGSKLLQGKIKKQKPISVPKPTHFSGKELIETAASQ
NSTKTTALPSSGSLLAQIRKRNNVSATDTDNQTSVVLPQHDLLVDIRDFVSFQAETNGQA
TTNEILHKFRGKLPSNDSALFKSMLTEICVFQRVNGGEGLWKLKEDFR
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggctactccgatgtcagcagccaagaatgagaatggagatcagacacagagtacagct
gctgctcctggacttgccctcccagaaaatggacaagaaactacagatgtgctaccacca
actacaacctcagatattccacaaactgacacccaatcatcaggcgtagatccatcaacg
ccgtctgcaagcgcctgtctgaaaaacctagcaggtaacatcgatcaaaatggggcctcg
accagcagcaaagacgaggcgtcgaccagtacagggggcgtgttctcaatcaacagggac
ctcatcccgtcagtgccgaaccagatgcaggccactgagctccagggtcttgaaggagtc
agtgtcttcgatcaggaggagtttgagaagggggtcttagagcaggttgatcaggccatc
tcggccaggcagcaagttgtggaccgtgagagggctgagaaggacctgaatgctgtcctg
gttgacataaggtcatgcaagaaggatctaggacatattactaaagtgatgtccaacatg
aacagtaagacgattccattaacatttgctcagaaggaagttcagaggaatctcatctcc
atgcgcacaaagagagacaacaaggccaaacaactcaagactctccgtgctcgacagcga
tctctacttaccaagttgagcggatctgatgtcaatctacaggtttcagatgatgaggaa
gaaggtcaagatcaaaacgttcagacgtaccaacagcttttatgtcgcagcccaacctca
gagggaatcccaacacaacctgcaaaagagacagaacaagaacgtcttatacgcctcgga
gaaatgacaccctttggctcaatggtacagtccaaagcatcaacgagtaaaaaaaacctc
cacccacaacccatgacagactttgagaagtacatgacacaaaaaacacaagatgacatg
acacgtcgaaagaaagtcacccctcgtaaaccgactcccatgaaatcaaaatccgaaccc
atcaaaacccaaagttcacaacctactcataaaatagcaccagtccaacaggacgtcaaa
cagaagcaaaaagaactctcgaaaaaactgaagcagaaatcgacgaaaaagcctaccaag
gaaaccaaaaagaaaacaactgactcatcggatgatgagacatactttgtttacaaacca
gtgaggagtgagacttcagcgagttttccaaagtctcgcaagaggacgaagaagacacaa
gatctgaaaccccattgggggagtgatgctgagttgagtgactgggacaacgatgggaat
aacagtgagcagagtgatgaggattatacaccggggttcaacgacctatcagatgaagat
gaggagcgtttcacaccaaagaaaaaatccaagaagagaggtcgcaaggaaagcatctca
accgaagactttgaagatggtaccatagcatgtctggatgaccttaagaagtcatatggg
gtcaaagttcaacgttcaaaaagcggtcacaggaagttcaaatgcaaggatgatgctaca
caggatctgtattttcgtagattgaaagagaaccgtaggtccgagttggtgaagaagcag
cggatgattgagagaggggaggtggatagtgactcagagcctgaggaaatgcagtttgag
ggtgggctcatcataccaggcaaaatatggtgcaatctttacaagtatcagaaggttgga
gtgaagtggttgtgggagctccatcagcagcaggctgggggcatcattggagatgagatg
ggtcttgggaagaccattcagatgattgcattcttagctggactcagagggagcaagcta
cgcaatcctggttccagatacattggtcttggcccggtgctcattgtatgtccagctaca
gtcatgcatcaatgggtcaaggagttccataagtggtacccagagatgagggtagccatc
ttacatgactccggatcacacactggatcaaagagggcgctaatccatgacatagcactc
tgccatggaactctagttacgtcttattcagctgtgcgtattcaagagaagctcctacta
cagcatacatggcattatatagtcctggatgaaggacataagatccgtaatcctgatgct
gccgtcactcaagcttgtaaacagtttcgtacatgtcatcggctgatcctgtctggttcc
ccgatgcagaataatctacgtgagctttggtctctgattgactttgtcttcccaggcaaa
ctggggacactcccagtcttcatggagaagttctctgttcccattacgataggaggctac
tcaaatgctactcaagtacaggttcagacagcctacaagtgtgcctcggtgctccgtgac
accatcaacccatacctcttgagacgactcaaggcagacgtcaagcaaaacctgaatctc
cctagtaagagtgagcaggtcctattctgtcgtctctctgaggagcagattcagatctac
aaggattacctcaactccaaggaatgtcagctgattctgaacagggaatatcaggtgttt
gcaggtctgataacgctgcgtaagatctgcaaccatcctgacctggtgagcggcggtccg
cgcatcatcaaaggagacaccagcctagaggccgtgcaggcagcgaacgatcctgcaatg
cagtatggttattggcaacgctccgggaagatgatcgttattaactcgttgctgaagcta
tggagtaagcagaaccacagggtgttgctgttctcacagagtaaacagatgctggacatt
attgaggactttgtgaagaaaacctacacctacatgaggatggatggtactactccaatc
tcatccagacagcctttgatacagcagtataacaatgacccatcaatctttgtcttcttg
ctgaccacacgagtaggcggccttggtgtgaatctgaccggagctaaccgggtggtcatc
tttgaccctgattggaacccgagcacggacacccaggccagggaacgggcgtggcgtatt
ggccagacacgccaagtcactatctatcggctcatcacagctggggcaatagaggagaag
atttaccacaggcaaatcttcaagcagttccttaccaatcgtgtcttaaaggatcctcgt
caacgtcgcttcttcaaatccaacgacctctttgaactttttaccttgacttcagacagc
aaccagcacggcacggagaccagcgccatctttgctggcgtcggctcggacgtcaaggtc
ccgacaactgcccacagaccagcgaggaaaaagtccatcgagaggagagtcaagacagaa
cttcagggaaggaaggaaaggaatggagtaaggaggatggaaaaccatgattccaaaatg
gaaactggagaggtgaaaagcgaaattcaaaatggtgtttcgccggaagatattcctgga
tgcagcaggtctgcggagaatggtgttgaatcggaggcagggataacttcaaggagtaat
ggaaggcaatccttggatgtagagatgggagatcaggctggaacgagtaaaggggagaag
agcaatgctgagagaaagagaaggaaaaagaaaaaggatgcaaggcttgatggacatcgt
attgctcacttagccaagcacactgcatatcaacccaagtcggaacacggagagccaaag
gatgaacagagcgatgcacagaaagatgactatgtcctcagcaaactattcaagaaatca
ggagtacacagcgccttgcagcatgataacatcatggaggcagctagccctgattatcta
ctcgtagagggagaagcagaacgggttgctagggatgccgtcaaggccctcaaagattcc
agacgtcactgccatcgagccacctcagggttacctacatggactggatctggagcctct
ggaggcaccacaaccccgcctaagaaaccaaggtttgggcagaagtcaaacaacaaagta
gctggtttgctcggtggcagtaagctgttacaaggaaagatcaaaaagcagaagccgata
tctgtcccaaagccaacacacttctccggtaaggagttgatagaaactgcagcatcacag
aacagtaccaagaccacggcccttccatcttcaggatccctcctagctcagatacggaag
cgcaacaatgtctccgccacggatacagacaatcagacatctgttgtcctcccgcagcat
gatcttctcgtggacattcgggactttgtgtccttccaggcagagaccaatggccaggcg
acaacgaatgagatccttcacaagttcaggggaaagcttccatcgaatgattcggcgttg
tttaagtccatgctgactgagatatgtgtgttccagagagtgaacggtggagagggattg
tggaaactcaaggaggactttcgttga
DBGET
integrated database retrieval system
