Luidia clathrata (European starfish): 117292294
Help
Entry
117292294 CDS
T10152
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117292294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117292294
03036 Chromosome and associated proteins [BR:
arun03036
]
117292294
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117292294
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117292294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
117292294
NCBI-ProteinID:
XP_033630190
LinkDB
All DBs
Position
7:13364257..13380046
Genome browser
AA seq
674 aa
AA seq
DB search
MMHHSSMAAYNDRETSLMTIGDPDSGTHCLSSVWGLGHQLLLHAGNGNKRHFEGRGHEAG
FDHAHPARLHWVKWQTEMHKPIARKLVAQSHDVFVALQKHGSESPDSTRKPQMVKFSRRY
RAFMGECVQDLLRAATASNVTREEQESYTAQSELLQTMGIVWNLCEILFVEILPGGVVLQ
QLQDWLKLHFTEGDQYARKVLQSDGCETNEDYWYAIFIYVMQGRLVEARHLLSLPLDHQQ
DTLQVYRRMDKLMNDMPIFSATSRQSLAEFDLKWRHWQDQCHQALEDNVFISFDPLNTIC
RILSGNQSVLLELEDLTGSWYQMLVTKLLYTNPTVKALDLEYHAKACIDVFGGVSRMGEL
DTILKAAFEFDVHQVIKVSSLNLSNWWFVAHLADLLHHCGQLDSHQLNFGSNLREFLLLD
YASTLMSHESLWQVVAGYLDHCPEFGSHYLELFIERVPLQSEKKAMKVLRICEQREMTDQ
VKSICKVLGMRSFQHGQLGSALSWCIRSKDAAFATFLSDRFLSEYSAGGGFSNLDLIDNL
GAAMLLSDRLTFLGKYREFHKLYEHGEFQEAASLILSLLTAKLAPKSFWLILLTDVLPLL
ELDVVIFSSHQTFELLHCLNELMQWYTSEDYLKSEAASSKSKGQQELESDKLELLKLALA
RNLARASQEEGILE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaccattccagcatggcggcctacaacgaccgcgaaacttcacttatgaccatt
ggagatcctgattctgggacccattgcttgtcatcagtctggggtctaggtcatcaatta
ctgcttcatgctggaaatggaaataaaagacactttgaaggcagaggtcatgaggctggc
tttgaccatgcacatccagcaagacttcattgggtcaaatggcaaacagagatgcataaa
cccatagcaagaaagcttgttgcacagtcacatgatgtgtttgtagctcttcagaagcat
ggatctgagtctccagattccaccagaaaaccacaaatggtgaagttcagtcgtcgatac
cgagccttcatgggggaatgtgtacaagacttgctccgagcagcaacagcatctaatgtg
actcgtgaggaacaagagagttacaccgctcagagtgagttactgcagacgatgggtatc
gtgtggaatctatgtgagatcctctttgtggaaatcttaccaggtggtgtggtgttacaa
cagctacaagactggctgaaactccactttactgaaggtgatcagtatgccagaaaggtg
ctgcagtcagatgggtgtgagaccaatgaggattactggtatgctatatttatctatgtg
atgcaaggacgcctggtggaggccagacatcttctatctctccctcttgatcatcagcaa
gatactcttcaagtctacagaagaatggacaagctaatgaatgacatgcctatattcagt
gccactagccgccaatcactagccgagtttgatctaaaatggcgccattggcaggaccag
tgtcatcaggccctcgaagacaatgtatttatatcttttgatccgctgaatacaatttgc
aggatcttatccggcaatcagtcagtgttgttagagcttgaagatctaacaggcagctgg
tatcagatgctagtcactaagcttctctacaccaatccaacagtcaaggcattggatctt
gagtaccatgctaaggcctgcattgatgtatttggaggtgtatccagaatgggggagtta
gacacaatcttaaaggcagcctttgagtttgatgttcaccaggtcatcaaagttagcagt
ctgaatttgagtaactggtggtttgttgcccacctggctgatttactgcatcactgtggc
cagcttgattcacatcaactcaattttggttccaatctgagagagtttctacttcttgac
tatgcctccactctgatgtcacatgagagtttgtggcaggttgttgctggttacttggac
cattgtcccgagtttggaagtcattacctggagctgtttattgaaagagttcctctccag
tccgagaaaaaagcaatgaaagtattgaggatatgcgagcaacgagagatgactgatcaa
gttaaaagcatctgtaaggttctcgggatgcgctctttccagcatggccagctgggctcg
gccctgtcttggtgtatccgttctaaggatgcagcattcgctacgttcctctccgataga
ttcctctcggagtacagtgctggaggagggttctccaacctggatcttattgacaatctt
ggggcagctatgcttctcagcgatagacttacatttttagggaagtatcgtgagtttcat
aagctgtatgagcatggtgaatttcaggaggctgcaagtcttatactctcactccttact
gctaagttggctcctaaaagtttctggttgattttactgactgacgtcctacctttacta
gagttggacgtcgtcatcttcagtagtcatcaaacgtttgaattactgcactgtctgaat
gaactcatgcagtggtacacctcggaagattatctcaagtcagaagcagcatcctccaag
agcaagggacaacaagagctggagtcggacaaactggagcttctcaaactggccctagct
cggaacttagcaagggcttcccaggaggaaggcattttagaatga
DBGET
integrated database retrieval system
