Luidia clathrata (European starfish): 117292891
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Entry
117292891 CDS
T10152
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117292891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arun03021
]
117292891
03019 Messenger RNA biogenesis [BR:
arun03019
]
117292891
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117292891
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117292891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCHC
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
zf-CCCH_12
zf-CCCH_RBM22
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
117292891
NCBI-ProteinID:
XP_033630954
LinkDB
All DBs
Position
7:4490893..4500907
Genome browser
AA seq
294 aa
AA seq
DB search
MQSIVANVEGLRFDLETALEQQIGSQPLPFPGMDKSGSAVCQFYKQNNCHKGSMCPFRHV
GGEKSVVCKHWLRGLCKKGDECEFLHQFDMTKMPECFFFTKFGMCSNKECPFLHIDPESK
VRDCPWYDRGFCKHGPSCKNRHVRRVMCKNYLNGFCLEGSECKFQHPKFDLPVLEVKDGM
KKLICHNCRESGHKAVNCPKAPNQWSSSQQGRQQTDRVLGTVDTNAGGGSNQNPGQPQSN
GQHFQSHRPFRNMDTVKCFKCGEMGHFANRCPKGYNQAFLNNTNSDQNHQPNRQ
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcattgtggcaaacgtggaaggcttaaggttcgatttggagacggctttggag
cagcaaatcgggtcgcaacctctcccttttccagggatggataagtcaggctctgccgtg
tgccagttctacaaacagaacaactgccataaagggagcatgtgtccgttccgtcatgtg
ggtggagagaagagcgttgtatgtaaacattggctgaggggactctgtaagaaaggagac
gagtgtgaatttctccatcagtttgatatgaccaagatgcctgaatgtttcttcttcacc
aagtttggcatgtgtagcaacaaagaatgtccatttcttcacattgacccagagagtaag
gtcagggactgcccctggtacgacagaggcttctgcaaacacggtccctcgtgtaaaaac
cggcacgttcgaagagtcatgtgtaagaactacctcaatggcttttgtcttgaaggatca
gaatgcaaattccaacaccctaagtttgaccttcctgtgctggaggtgaaggatggtatg
aagaagttgatatgtcacaattgtagggagtctgggcacaaggcggtcaactgccccaag
gcacccaaccaatggagctcctcacaacaaggcagacaacaaacagacagggttctcggt
acggtagacactaacgctggtggaggaagcaaccagaacccagggcagcctcagagcaat
ggtcaacatttccaatctcatcggccattcaggaatatggacaccgtcaagtgttttaag
tgtggagagatgggccattttgccaacaggtgtcccaaagggtacaaccaggcattctta
aacaacaccaatagtgaccaaaaccatcaacccaacaggcagtag
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