KEGG   Luidia clathrata (European starfish): 117292982
Entry
117292982         CDS       T10152                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:arun00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117292982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:arun03009]
    117292982
Ribosome biogenesis [BR:arun03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    117292982
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Utp13 WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_EIPR1 WDR90_beta-prop_4th NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_IFT122_1st Nucleoporin_N Mcl1_mid Beta-prop_SPT8 UTP15_C Cytochrom_D1 Pox_TAP
Other DBs
NCBI-GeneID: 117292982
NCBI-ProteinID: XP_033631060
LinkDB
Position
7:complement(20398135..20419581)
AA seq 1067 aa
MAVKLKSNFRVESKISALYTGGKVHLSTNGLHLFCVHGTSINILDTSTGKVVHSIKEEDC
DDVTSFAVTPDDKFLVVAHRNLLMKQWDWQEERCVRTWKAIHVGPIVSMAFDPTSTLLAT
GSSDSTIKLWDIVQQYCTHNLKGSQGVVSVVEFHPESGKLLLFSTSDDCKIRVWDLSTSR
CKAVLESHYSGVTSFAFTEDGMTMFSSGRDNIVTVWNLETYEATKTIPVYEPLESVIVPP
SDVDCSKIGISGNGSFFITAGSQGLLKVWDASTAKCVFTQQRQLPDLPQPEGQSEGKGHD
QPMGSHINQAMFCGALGVLAVVTYDHNILLFSVKDFELNKQFVGYNDEILDLCFMGENDT
HIAVATNSEQLRVFELSSLSCQILPGHTDIVLALKVFKNGLMLASSSKDNTVRLWCMEPT
TGSVYCVAIGKGHTHSVGALTTARLSNKFFVSGSEDCTIKIWDIPSTLPTQKGSTPVQIH
GRFTERAHEKDINSVAISPNDKLLATGSQDRTAKLWHLEKETSLGSFRGHRRGIWCVQFS
PVDQALATSSADGSIKIWALSDFSCVKTFEGHDASVLNVLFLSRGMQLVSCGSDGLLKLW
TIKTNECVKTFDEHSQKVWALAANRGQDLVVSGGGDSNILVWKDVTELELEEEMEKEEDQ
IEKEQELSNLLHDKKYLKAIGLAITLNQPFRVLTIMKNILDEPGGEKKLERTMKKMRQDQ
IESVLGFCKHWNTNSKHCHTAQTVIAIILRQVTPDDLLTFPSMQQTLEGLIPYTERHFER
MNRLLQQAMFVEYTWQCMRRATGPVDDSLVLKSSMGETSASFVIDTEPTVVTGNITDRLK
LGQRSTDAEESSEDDEEDDDEDEVEDAEMEENSLKGLMSDEDNDDSHDQGERSQRGQKSP
GVREAGESSEDDDEEDSSSSDDDNDDDNDYGGHLEEELITPEKTKKVKPKKKAQQEMISS
PKTTSLSSVEHKASPKSTPKLLRSKKRKSEMADSIGSDGTADIDESDHDEDDGIAIRTRS
KDTKKMKTKTPRKSPVVNKKRTVKTPSSIGKSAKKAKIAGLSTSLRS
NT seq 3204 nt   +upstreamnt  +downstreamnt
atggcggtcaaactcaagtcgaactttcgtgtggaaagtaagatctctgcattatacaca
gggggtaaggttcatctctctaccaatggacttcatttgttctgtgtacatggaacaagt
atcaacatacttgacacctccactgggaaagtggtacattccattaaagaggaagactgc
gacgatgttacatcatttgcagtaactccagatgacaagtttctagtagttgctcatagg
aacttgttaatgaagcaatgggactggcaagaggaaagatgcgtccgcacatggaaggcc
atccatgttgggcccattgtcagcatggcctttgaccccacctctaccctgctagccact
gggagtagtgatagcaccatcaagctgtgggacatcgttcagcagtactgcacccacaac
ctcaaaggttcacagggagtggtcagtgttgttgagtttcatccagagtccggtaaactt
ctcctcttctctacatccgatgactgcaagatacgagtatgggatctcagtactagcaga
tgtaaagctgtattagagagccattacagtggagtcaccagctttgcattcaccgaggat
ggcatgacgatgtttagttcaggtagagataacatcgtgactgtgtggaacttagagacg
tatgaagccaccaaaacaattcctgtctatgagccgttagagtctgtcatcgtaccacca
tctgacgtggattgcagtaagattggcatcagtggtaacggctcattcttcatcactgct
ggatctcagggtctgcttaaggtatgggatgcttctacagcgaagtgtgtattcactcaa
cagcgacagctccctgacctccctcagccagaaggtcagagtgagggcaaaggtcatgat
caaccaatggggagccacatcaaccaggcaatgttctgtggagcgttgggcgttctcgct
gtggtcacctacgatcataacatcctcttgttcagtgtgaaagattttgaactcaacaaa
cagtttgttgggtacaatgacgagatccttgatctatgctttatgggtgagaatgataca
cacattgccgtggcaaccaatagtgaacagcttcgtgtttttgagctttcctccctcagc
tgtcagattctacctggacatacagatattgttctcgcacttaaagtttttaagaatgga
ctgatgttagccagtagctccaaggacaacactgtgcgactttggtgtatggagccaacc
acaggctcagtgtactgtgtagcaataggtaaaggacacacacattcagttggagcactg
actactgcaagactatctaacaagtttttcgtcagcggcagtgaggactgtaccatcaag
atttgggatattccatctaccctacccactcagaaaggcagcacacctgtccaaattcat
ggaagattcactgagcgtgctcacgaaaaggacattaattcagttgctatatcgcccaat
gacaaactgctagccactggttctcaagacaggacagccaaactatggcaccttgagaag
gagactagcctggggtcattcagaggtcatagacgtggtatttggtgtgtccagttctct
cctgttgatcaggccttagcaacaagctcagcggatggttccatcaagatatgggctctg
tctgatttcagctgtgtcaagacgtttgagggccatgatgcatcagtcttaaatgtcctc
tttctgtccagagggatgcagcttgtttcatgtggctcggatggtttgctaaaactctgg
acaatcaagaccaatgaatgtgtgaagacatttgatgaacacagccagaaagtctgggca
ttagctgccaatagagggcaggatttagtggtcagcggtggcggtgactcaaatattcta
gtttggaaggatgttacagaactagagcttgaagaggaaatggagaaagaagaagatcag
atcgagaaggagcaggagttgtctaatttgcttcatgacaagaaatatctgaaagcaatc
ggcctggccatcaccctcaatcaacctttccgagtactcactattatgaaaaacattttg
gatgaacccggtggagagaagaaactggaaaggacaatgaagaagatgaggcaagaccaa
atagagtctgttctaggtttctgtaagcactggaacaccaactctaagcactgtcacaca
gcgcagaccgttattgcaatcatcctgagacaggtcaccccagatgacctcttgaccttt
ccttcaatgcaacagacactggaaggcttgattccatatacagagcgtcattttgagagg
atgaatcgtctactacagcaggcaatgtttgtggagtatacctggcaatgcatgagacga
gctacaggacctgttgatgatagtcttgtcctgaaaagtagtatgggagagacaagtgca
tcattcgtcatcgatacggaacctacggttgtcactggaaacatcactgacagacttaag
ctgggtcaaaggtcaacagatgctgaagagagcagtgaagatgatgaagaagatgatgat
gaagatgaagttgaagatgccgagatggaggaaaattctttgaaaggactcatgagtgac
gaggacaacgatgatagtcatgaccaaggtgagaggtcacagagaggtcagaagtcacca
ggggtcagagaggcgggagagagcagtgaggacgatgatgaggaagattcttcatcgagt
gacgacgataacgacgatgataacgactatggtggacatcttgaggaagagctcattaca
cctgagaaaaccaagaaagtaaaacccaagaagaaagcccaacaagagatgatttcctca
cccaaaacaacgagtctcagcagtgtcgaacataaagcgtctcccaaatcgactccaaaa
ctcctacgcagcaaaaagaggaaatctgagatggcggattccattggaagcgatggtacg
gcggacatcgatgaaagcgatcacgatgaggatgatgggattgcaatcagaactagaagc
aaagatacaaaaaaaatgaaaacaaagacaccacggaaatcacccgttgtcaataagaag
aggaccgtaaaaacaccgtcttctattggtaagtcagccaagaaagctaagatcgctgga
ctgtccacgtccttgcgatcatag

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