Luidia clathrata (European starfish): 117293108
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Entry
117293108 CDS
T10152
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117293108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arun03041
]
117293108
Spliceosome [BR:
arun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117293108
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Cas_Cas7
Motif
Other DBs
NCBI-GeneID:
117293108
NCBI-ProteinID:
XP_033631217
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Position
7:complement(18412445..18425557)
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AA seq
493 aa
AA seq
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MSLADELLADLEEIAEEGEELEAINEEDEDIEDVQDIAMDIDTRVDSIKSIAKLRHSKEL
ANVMTQIEHFQENPRKEEVVGPVEADPEYMLIVEANNLSVEIDNEINIIHKFVRDNYQKR
FPELESLVPTPQEYLRTVRELGNTLDNTKTNEQLQAILTNAVIMVVSVSASTTQGTELSD
EELATVFEACDMAFDLNEAKSRIQAYVESRMSFIAPNLSAIIGSSTAAKIMGAAGGLTNL
SKMPSCNILVLGAQRKTLSGFSSVATNPHTGYIYYSDIVQATNPDLRKKAARLVSGKCTL
AARVDSFHESPNATIGFNLKEDIDNRLAKLQEPPPPKQAKALPAPIDVSRKKRGGRRVRK
MKEKLGMTSMRKAANRMSFGEIEDDAYQEDLGFSLGQVGKGGTGRIRGPTVDNKTQVKIS
KSLQRKLQRQQTHGGKSTVRGRETSGTASSVAFTPLQGLEIVNPHAAEKKNSEESVGYFS
TTTGFKKVMSAAK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgcggatgagcttcttgcagatttggaggagattgcagaggagggggaggag
ctagaggccattaatgaggaggatgaagacattgaagatgtacaagatatcgccatggac
attgatactagggtggactcgatcaagtctattgctaagctcagacacagcaaagagttg
gcaaacgtgatgacccagatagaacactttcaagaaaatcctcgcaaagaagaagttgtt
ggtcctgtagaagctgatccagagtatatgctgattgttgaagctaataacctgagtgtg
gagattgataatgaaatcaatattattcacaaatttgtaagagacaactatcaaaaacgg
ttccctgagctggaatcactggtcccaacaccacaagaatacctcagaacagttcgggaa
cttggcaacacccttgataacaccaagacaaatgaacagctccaagccatcttgaccaat
gctgtgataatggttgtgagtgtatcagcctctaccactcaggggactgagctatcggac
gaggaactagccactgtctttgaagcttgtgatatggcatttgatttgaatgaagccaag
tcaagaatccaagcctatgtagaatctcgtatgtccttcattgcaccaaacctgtctgct
ataatcggatcatcaacagcggccaagatcatgggtgctgctggagggttaaccaatcta
tctaagatgccatcctgtaatatattggtccttggagcacagcgtaagacactatcaggc
ttctctagtgtagccacaaacccacacacaggttacatctactacagtgacattgtacaa
gcaacaaatcctgatttgagaaagaaagcagcccgccttgtttcagggaaatgcacccta
gctgcaagagttgacagcttccatgaaagtcctaatgccaccattggtttcaacctcaaa
gaggatattgacaacaggttagctaagctgcaggagcctcctccacccaaacaggctaag
gcattacctgcacctatcgacgtcagcaggaaaaaacgtggtggaagaagagtccgtaag
atgaaagagaagctaggaatgacaagtatgcgcaaggcggctaatcgcatgtcatttggt
gagatagaggatgatgcttatcaagaggatctgggcttctctttagggcaagttggcaag
ggtggaaccggaaggatacgaggtccgactgtcgataataaaacacaggtcaagatatcc
aagagtcttcagcgcaagttacagagacaacagacacatggagggaagtcaacggtaaga
ggccgtgagacatctggtacagcatccagtgtggcgttcacacccctacagggtctggaa
attgtgaatccgcatgcagcagagaagaagaactcggaggaaagtgtcggatatttctca
acaacgacaggatttaagaaagtaatgtctgccgcaaagtga
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