Luidia clathrata (European starfish): 117293266
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Entry
117293266 CDS
T10152
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117293266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117293266
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arun04147
]
117293266
Membrane trafficking [BR:
arun04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
117293266
Exosome [BR:
arun04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117293266
Exosomal proteins of colorectal cancer cells
117293266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
BAR_3
HTH_KIF26A_B_1st
Motif
Other DBs
NCBI-GeneID:
117293266
NCBI-ProteinID:
XP_033631386
LinkDB
All DBs
Position
8:complement(17708953..17720472)
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFEWGNGSMLQGETQVKQQHGVRLHDGTNKTAFDRGILTLTTHRVIWTDSIQQTTLIN
LSLALVVYIEEVPDGKGKSPRIAIHLHPSPSNKPPGPVMMSGHSFIQLTFKESGETEFFR
CLTEELSKRRWEYMTPAPRPGGKHHQPKAIHAGIVGIERNLEKKWKDTDQTISKAFEDLN
KLMEKAKEMVDLSRTIANKIKDKQGSITEDETVQFKSYLLSLGIANPVTRETHGSGTKYH
EELAKQLADVLTTQIEESGGMMSLSDVYCRINRARGMELLSPDDLVDACRQFERLRLPLR
LREFSSGVMVIELVSKGEEAVIRQTAELMTQKGSLTPDELSQSAGVSILLAKGRLLAAEE
AGQACRDESVEGIRFFPNLFLNPPAR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtttgagtggggaaatggaagcatgctccaaggtgaaacacaagtgaaacag
caacatggagtaagacttcacgacggcacgaacaagactgcatttgatcgaggcatatta
acgctcacaactcatagagtgatctggacagactcaattcaacagaccacgctcatcaac
ctgtctttggcgctagtagtgtacattgaagaggttccagatggaaaaggcaaaagtcct
cggattgccattcatctgcacccgtctccgtccaacaaaccaccaggtcctgtcatgatg
agtggacattccttcattcaattgacgttcaaagagtctggagaaaccgagtttttcaga
tgcctgacagaagaattatctaagaggagatgggaatatatgacgccagcgccaagacct
ggtgggaagcatcatcaacccaaagccatccacgctggtatcgttggcatcgagagaaac
ttggagaaaaaatggaaagacacagaccaaacaatatccaaagcgtttgaagatttaaac
aaactaatggaaaaggcaaaagaaatggtggacctttctagaacaatagctaacaagatt
aaagataaacaaggaagcataaccgaagatgagacagtgcaattcaagtcctacttgtta
agtcttggtatcgctaatccagttactagagagacccatggttcaggtactaagtaccac
gaggaactggctaagcagcttgctgatgttttaacgacacagattgaggagagtggtggc
atgatgtccttatcggatgtgtactgcagaatcaatagagcaagaggaatggagctactt
tctcctgatgatcttgtggatgcctgccgacaatttgagcgactgaggctacccctcagg
ttacgagaattcagcagtggtgtcatggtgattgaactggtatccaagggagaggaggcc
gtaatcagacaaactgctgaactgatgacacagaaaggttccctgactccagatgagtta
tcacagagtgcaggtgtatcaattcttctagcaaaaggaaggctcttggcagcggaggaa
gctgggcaagcatgcagggacgagtctgtcgaaggaatccgattctttccaaatcttttc
ctcaatccgccggcgagatga
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