Luidia clathrata (European starfish): 117293267
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Entry
117293267 CDS
T10152
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117293267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117293267
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117293267
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
117293267
NCBI-ProteinID:
XP_033631387
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Position
8:10809775..10824681
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AA seq
619 aa
AA seq
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MAASGGFSFGGASSFSSTKPTATTFGTPSLTTTNAGSLTFGTPSTTNTASGFSLGGAKTT
GGFGFGAGGTTSAAGSLFGATTTPSTTGGLSLSLGLKPTATTTSAGGFGFGGTTAAKPGG
LFGTATTSAATGFGFGGAPAAGGLTLGGLSGPAKTSTSGLTLGGSLGTAPTGFSLGGGAT
TTTAAVSKGLGGVDPLSLASSSTAGTSGTVTSGTSDNKTIKETLLHQDIHATVSSFKSYV
KKQKAIREDITRFSVKPYHHVQEEITALKQLLAVVSNGLQRNAIAIHKLKFESAQELKNA
EVAHRTQEIPPALQLENYVPTEYFQRLVEQFEDQMHLCRQQIEQMESYMASLAQPNIYTP
QELAVIMVKLNETFIALAAQLQSVHEAVRAQKEQYLNYRRVYHSDVENVFTTQKKTAERE
RRIGTLPMGPGAFDNVSNAAAIAMATALQTAQKPAGIQAAGLTGPFTAALGGTSTLSTGG
FGTSSLGAGGLGGLGTTGGLGTTGLGTGGFGTGFGTQSTGLGLGTQSLGLGTGTGLGTTT
GFGTGLSTGSSTFGFGTTKPAATAASFGGSLSAGPTVGSTGFGFGTTTGALGTSSFGSTT
TGKPLQLQKPPSKYRKGTR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccggggggttttcttttggcggagcttcttcattttcatccacaaaacct
acagcaactacttttggaacaccatcattaacaacgacaaatgcagggagtcttaccttt
ggaacaccctccacaaccaatacagcatctggattttctttgggtggagccaaaacaacc
ggtggatttgggtttggtgcaggaggaacaacgagtgctgctggcagtctttttggtgca
accacaacaccatctacaactgggggcttgtcactgagcttaggtctgaaaccaactgca
acaaccacatcagctggaggttttggctttggaggaaccactgcagccaagcctggaggg
ttatttggcacagcaacgacatcagctgcaactggatttgggtttggcggagctccagcg
gcaggaggattgaccctaggaggattgtcaggacctgcaaagacatctacatctgggtta
acattaggaggatcattagggacagcgcctactgggtttagtctgggaggtggtgccaca
acgactactgctgcagtcagtaaaggactaggaggagtggatcctttatctttagcttca
tcaagtacggcaggtacaagtggtacggtcacatcgggtaccagtgataacaagacaata
aaagaaacccttcttcaccaagacatccatgctacagtcagctctttcaagagttatgtc
aagaaacaaaaggccatccgggaggacatcacacgcttttctgtcaagccataccatcat
gtacaagaagagataacagctttgaagcagctcctggcagttgtgtctaatggcttacaa
cgtaatgccattgctattcataaactcaagtttgagtcggcacaagagctgaaaaatgct
gaagttgctcatagaactcaagaaattcctccagctcttcaacttgagaactatgtacct
acagagtacttccagagattagtcgagcaatttgaagatcagatgcatttgtgtagacag
cagattgagcagatggagagttatatggcatctctagcacaaccaaatatctacacacca
caagagttggctgtgatcatggtgaagttaaatgaaacatttattgcattggctgcccag
ctacagtcggtacatgaagctgtcagagctcagaaagaacagtatttgaattatcggaga
gtctaccacagtgatgtggagaatgtgtttaccactcaaaagaagactgcagagagggaa
cgcagaattggtaccctcccaatgggaccaggggctttcgataatgtgtcaaatgctgct
gctattgccatggcaacggctttacagacagctcagaaaccagcaggtatccaagctgca
gggttaactggtccgttcactgctgctttgggtggcacgtccaccctttccactggagga
tttggaacaagttctcttggagcaggtggactgggtggtctgggtacaacaggaggattg
ggaactactggactaggtactggtgggttcggtacaggcttcggaacccagagtactgga
cttggactgggtacccagtccttggggttgggtacaggaacaggactgggtacaactact
ggatttggaactgggctttctactgggtcatccacatttggatttggtacaacgaagcca
gcagcaactgcagcaagttttggtggcagtttgagtgcaggaccaactgtgggcagtaca
ggattcggttttggaactactacaggggccctcggaaccagtagctttggatctaccacc
acagggaaaccattacagctgcagaaaccccccagcaagtacagaaaaggcaccaggtag
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