Luidia clathrata (European starfish): 117293347
Help
Entry
117293347 CDS
T10152
Name
(RefSeq) TBC1 domain family member 1-like isoform X1
KO
K17902
TBC1 domain family member 4
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117293347
Membrane trafficking [BR:
arun04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117293347
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117293347
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117293347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PID
DUF3350
PTB
HerA_C
Motif
Other DBs
NCBI-GeneID:
117293347
NCBI-ProteinID:
XP_033631524
LinkDB
All DBs
Position
8:4727701..4790515
Genome browser
AA seq
1495 aa
AA seq
DB search
MSQPVRLGTTKKALSLDSGLRTGVVGKQQHQQAQPPSHQGAINAAPDRTLSVDSTRNKNL
PGDNAEKLYSTCHIVPEPFTISEEEMPVALTPSPDSGSNNNATTSSCTTSFSNTSVVNLE
ESDDSIMDGSTLDPSKVKMRTSLEISPRDRRSKMLDLHPVIVTGGRDVIDGNAKAFFKMK
YYGNVQLDRRITQPMLPWFLADKLRRARRDVQNIFLQVSSRGVLGISESKGSIVFEHFPQ
NITRFSRGHNKKCFAYLWRSESDSNFTCFVFETSDPDVVHQVAVNVRDASKEAMKYNLVS
EEEKAGVEAIENIRINNATMFEVLYCGRVTVSHKRAPPTLIDDTIEKFNVHEIETKKKKL
AVTRKRHFSSGDQNGIISPSSDDASMATASVDTDRLSMEDTASSVSSESITSSPLNPDAD
GDSIGSRSSQKDMANVLLSPVTRDRVSSAGAGMLKHLDGGYGDTLSSASSTTSTTSAETK
VLTSGHNRTMLFQIGKTMLTLISPDKKSFMLTKKFNDISFCSQGIKEPEFFGFICREKST
VSSYMCYVFKCQSEPVVDSIMTTLRQSFNVALQKSKLHVICGTCPMHQLHKLCQTLEGQS
PEKGHSILLKQLETLSESERSSVVTKTKIQSVYRIEARATSAQEANEIIMSHLISICEQQ
QNAHTHNSDTEVGGGGDSTNASPTQERKVLTKGASTESGEGKVGAFKKAKKSLATSFENL
LSRNKKKNSIEDQTSFPNTGYRSRQGTQESINSVESPHESPRDSPVSTALHTPPVQIVTP
TTTHKYSMDDIPTPPDSKDRPRRPSPIMCKQDSLPEFMVSPMTRPRSKTLGDTPSPSPKT
PPPESSFQYPQTAKTALQAVQKPTPLRKVPLSRTNSAFYDDRPHTLTLSPYSPYPGASTA
RRMSWRQQIFNRVVTPISESKHGQVSDINEEAEEDVFETEGLPSIRGLERQDSLPRPKRF
SSRQQISDLWKKAIREQILLIRMDKENRNLQARQDAAHEKRIKLDYEEITPCLKEVTITW
EKILSRPNRSNVRLSGDEMTDTFRQGIPKTRRGEIWQLICEQQKLIGCVVSAKIPEHEPY
KELLKQLTIHQHAILIDLGRTFPTHPYFANPLGRGQLSLFNLLKAYSLLDTDVGYCQGLS
FVAGVLLMHMDEEQSFEMLVYLMFSLGFRRQYKPDMIALQIQMYQLSRLLHDFHKRLYDH
LEQNEIGPSLYAAPWFLTLFASQFPLGFVAKVFDLIFLQGFEVIFKVALIVLGSHEELLL
HCDGFEAIIEFLKDTLPMLGIIQMENVINKAYQLDISKQLHAYEVEYHVLQEEMAPSPVH
QRSRAVTDIQKLEGANRNLRRHNNELLEQLQGAHTSIHSQEAMIHNLRKNEDKHKSEIRS
LNLERAALLNTVAKLRSLLPKDILLEDAGINFTTTSILSESSFDEKDSSPDQKADSGTGN
LSGSQTCSLDELDTEVASINKKKKKWGRNHSNGSSGSEISTSGSSEIDMPTDNLS
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcctgtacgcctaggtacaaccaaaaaagcactgtccttggacagtggtttg
agaacgggagtagttggtaaacaacaacatcagcaggctcagccgccgagtcatcagggt
gctataaacgccgcacctgatagaactctgtccgtggacagtacacgcaataaaaatctc
ccgggtgataacgcagagaagctttatagcacttgtcacattgtacctgaaccttttaca
atcagtgaagaagagatgccagtagcactcactccttcaccggactcgggtagcaacaat
aatgccacaacatcatcttgtacaacctcattttcaaacacatcagttgtgaatctggag
gagagtgatgatagcatcatggatggtagcaccttagatcccagcaaagtgaagatgcgc
acatccttggagataagccccagagatagacggagcaagatgctggatctccacccagtc
atcgtgacgggtggtagggatgtgatcgatggaaatgccaaagctttctttaagatgaag
tattacgggaatgtgcaattggatcgacgtatcactcagccgatgctgccatggtttctg
gccgataagctgcgccgagcgaggagagatgtccaaaacatcttcctgcaggtgtcgtcg
aggggagtactgggcatttcggagagtaaaggctcgatcgtctttgagcattttccgcag
aacattacacgtttctcgcggggccacaacaagaaatgttttgcgtatctgtggagatcc
gagagtgattctaacttcacatgttttgtctttgaaacatctgatccagatgtggtgcat
caggttgctgtaaacgtacgcgatgcatccaaggaagccatgaagtacaatctcgtcagt
gaggaagagaaagctggagttgaggccattgagaacatacgcatcaacaatgcaaccatg
tttgaggtactgtactgcggacgggtcaccgtctcgcacaagcgcgccccgcccaccctc
atcgacgacaccatcgagaaattcaatgtacacgaaatcgaaaccaaaaagaagaaattg
gccgtgacgcgtaaacgtcatttctcaagcggagatcagaatggaataatatcgccgagc
agtgatgatgcgtctatggcgacagcctcggtagacaccgacagactgagtatggaggac
actgcatcatcagtcagctctgagtctattacctcgtcccctctcaatccagatgctgat
ggggacagcattggtagccgctccagccagaaagacatggccaatgtcctgttgtcgcca
gtcactagggacagagtaagttcggccggggctggaatgctgaaacatctggacggagga
tatggagatactttatcctcggcttcgtcaacgacctccacgacttcagcagagactaaa
gtgctaacaagtggacataatcgcacaatgctcttccagattggcaagacaatgctgact
cttattagcccagacaagaaatccttcatgctcaccaagaagttcaatgacatctccttt
tgctcacagggcattaaagagccggagttctttggcttcatctgcagagagaagtccacc
gtttccagctacatgtgttatgtcttcaagtgccagtcagagcctgtggttgatagcatt
atgaccaccctacggcagtccttcaacgtcgcgctgcagaaaagtaaactccacgtgatc
tgcggaacgtgcccaatgcaccaactgcacaagctctgtcagactttggaaggtcaatct
cctgagaagggacacagtattttgctgaagcagctggaaacgctgagtgagtcagaacgc
agctctgtcgtcacaaaaacaaagattcaatctgtgtacagaatcgaagccagagctacg
agtgcccaagaggctaatgaaatcatcatgagccatctgatcagcatctgtgagcagcag
cagaatgcacacactcacaacagcgacacggaggttggtggtggaggagacagcaccaat
gcaagtcctacgcaggaacggaaagtgctcactaaaggagcatcgacagaaagtggagag
gggaaagtcggggctttcaagaaggccaagaagtcactggcgacttcctttgagaacctg
ttgtcgagaaacaaaaagaaaaattccattgaagatcagacgagtttccccaatactggt
tacaggagtagacaaggcacccaagaatccattaacagtgttgagtcgcctcatgaatct
ccacgagactccccagtttccacagccctacacacaccccctgttcaaatcgtcacaccc
acaacgacacacaaatacagcatggacgacatccccaccccgcccgacagtaaagatcgg
ccccgccgaccgagccccatcatgtgcaaacaggacagcctaccggagttcatggtatcc
cccatgacacgccctcgcagtaaaacccttggtgacacgccttcaccatcgcccaagacc
ccgccccctgaaagcagctttcaatatccgcagacggccaagacagcccttcaagcagtg
cagaagccaaccccattgcgcaaggtgccgctgtcaagaacgaatagcgcattctatgat
gacagaccacataccctgacactaagcccttacagtccctacccaggagcatccactgct
cgtaggatgtcatggagacaacagatcttcaaccgtgtggtcacgccaatcagcgaatca
aaacatggacaagtgtcggatattaatgaggaagcggaggaagacgtgtttgaaactgag
gggttgccatctatccgagggttggagaggcaggacagtttaccaagaccaaagaggttc
agctcaagacaacagatcagtgatttatggaagaaggccatcagagagcagatcctattg
atccgtatggacaaggagaacagaaacttacaagctcggcaagacgctgctcatgagaaa
cgcatcaagctagactatgaggagatcacaccatgtctgaaggaagtgacgataacatgg
gagaagatcttaagtagacctaacaggagtaacgtccgactgagtggagatgaaatgact
gataccttcagacaaggtataccaaagactaggaggggagagatatggcagttgatctgt
gagcagcagaagctgatcggttgtgtcgtcagtgctaagatacctgagcacgaaccctat
aaggagctactcaaacagttaaccattcaccaacatgccatactcattgatctaggtcga
acgtttccaactcatccgtattttgccaatccactcggccggggacagctctcacttttc
aacctgctgaaagcgtattccctattggacactgatgttggttactgccaggggctgagc
tttgttgccggggtgctgctgatgcacatggatgaggaacagtcgtttgagatgctagtt
tatctgatgttctcactgggcttccgtagacagtacaagccagacatgattgcacttcag
atccagatgtaccagctgtctcgtctgctccatgacttccacaagcgtctgtatgaccat
ctggagcagaatgagatcggtccgtccctctacgccgctccgtggttcctcactctcttt
gcctctcagtttcccctcgggttcgtcgcaaaggtgtttgatctgatcttcctgcagggg
tttgaggtgatcttcaaggtggctttgatcgtactaggtagccatgaggagctgctatta
cactgtgatggcttcgaggccatcattgaattcttaaaggacacactgccgatgctgggg
ataatccagatggagaatgtcatcaataaggcctaccaattggatatttccaagcaatta
cacgcctacgaggtggagtaccacgttcttcaagaggagatggcgccctcgcctgtccac
cagcgctccagggcggtgacagacatacagaagctggagggagccaatcgtaacttgcgt
cgtcataacaatgagctgttggagcagctccagggagcccacacatccattcacagtcaa
gaggccatgatccacaacctgaggaaaaatgaagacaaacacaaatctgagatccgctct
ctcaacctagagagagcggctctgctgaacactgtcgccaaactccgcagcctcctccca
aaagacatcctcctggaggatgccggcatcaactttaccaccacctctatcctgtcagag
agctccttcgatgaaaaggactcctcgccggaccagaaggccgacagcgggacgggaaat
ctttccggctcccagacctgctccctggacgagctcgacacggaggtagcctccatcaac
aagaagaagaagaagtggggtcgtaaccatagcaacgggagctccgggagtgagatcagc
acgagtgggagtagcgagatagatatgccgaccgataacctatcatga
DBGET
integrated database retrieval system
