Luidia clathrata (European starfish): 117293368
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Entry
117293368 CDS
T10152
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117293368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117293368
03036 Chromosome and associated proteins [BR:
arun03036
]
117293368
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117293368
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117293368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
DUF2336
Motif
Other DBs
NCBI-GeneID:
117293368
NCBI-ProteinID:
XP_033631554
LinkDB
All DBs
Position
8:3943211..4005932
Genome browser
AA seq
1901 aa
AA seq
DB search
MFGANKTPFGGSSFGTGNFSSPHSTPHGQRTNAFSAKTPGTSGFGTPTAFGAQTPSTGLF
GTGTSAAGGLFGSTGNTFGQPPSGIGFGTSNTSSAAGTLFSSTSNAGTTGLFSTPSTSTS
FGAGGFGAAKPFGAAPSTGLFGQTAAATAPFGQAAAGASSLFGGGASSGLFGATAQSGTT
VKFAPVTSTDTMVKSGVTTNVSTRHLVITAMKEYENKCFEELRMEDYAANRKGSSGSSLL
GHGMTQVDNKPANLFGQQQQAAASSGAGFTFGQNKPTFGTGTSTFGNASGSLFGAQQQQQ
AAGLFGQKAGGFGTSSAPGASLFGATSTSAFGQSNQANKGLFGQTATTQSTGLFGSTPAA
SGTTGFGTGFGNTAFNQNQPTSLFGAKAGFGTTTTSTGLTLGSTTGTGLFGQQNKTGLSL
GTGASTGFGFGATPNQSASLFANKGTTGFGGLGAGIGTGLGTGFGATNTGTSLFGAASKP
TTLGGLGGFGTTSTGLGGGFGTGTGLNLGGATTGLGNATANLTVQDAQAQQQLLAIFNSP
FGDNPLFRNRLTDSDKREDILKPTSKAAQKALSSPLQHKVSSRPSAKLRPKPLIQGVSHK
SKLFDGLDDEDLTLNTEMFVPRRSVKKLVIKKKDDKSMEEDHLLNSSRSLAQEETLLSPL
PTYPSNPSSKPSPNQRQGSLDNEEVLETPGGTRLFSKPQSHQNDIPTTSSPRKQEDPDCT
ITDLNVQSKPSSKLNSSELSSTSDLDHSSLPDIQDDQENTPPPNPAGVTLRRSGYYTIPP
LEDLGSLMGENGECYVEDLTIGRSGYGSVFFPGFTDIAGLNLDEIVHFRRKEITVYPDDT
TKPDVGQGLNKKAEVTLDHTWPTDKTSRKAITDTERLTALNYEDKLEKATAKLGAKFIEY
RPKTGSWVFLVQHFSKYGLSDSDEDDEAPSQDPKKQKTQKQPGHKPTGAKKVPTKPAVKQ
PPKVGLDSRSQPIREQQEEEPMGDDIDMEMPGDSPIRGLGGFYLNGHVEAADTNQRGLSS
DQEELEEGLDHAASSHRLANVLGMNSHRLQVMKGSFFADDEPVEYDYALRSAPSQPRPSF
FDSPSRGSPIPIMEESYQERGLNRIMGGGVLWPRPMGSPAKYLAGMGPTADVRASPTPRA
VKDELLDPSDHYVSGLFAAPKQYPAFTGPHHYPSGMTQDRPSRLVGSRPRQTILPLKQSV
ICGKVPCIADAGLVMSRSFRVGWGPNWTLVHSGKAVGQRMSALDIKQEPAAFPLLTAKQP
SKSSLDATPFTITVEKLNLAPHLLGADSKVLDLHERSLGVQLHHSVCSTSQTCPVFAPKP
GVDCLHDFAKTAMKDCQERLTADETTLEHSQLVWKLMVALWGRLPDEDQQELDPSGYPFH
KARREAFSRWLESGSEKRINREVQDSKFKDMGHIEAVFSLLTGHQISAACAAAQRSGDHR
LALLLAQAGSTQEIKLLITKQLSDWHEMGVDKFIAPEYLQVYALLAGQLVWQSSHNSINT
CQNLDWKRALAVHLWHACKPVASIQDALAEFDKGFHGESTLGRYCPVPRPPYMENNPEVY
PEDGDMEYEEGETDGYTVWDMCYHLVKLYTDHTHRLERVLAPTTHTAYQLDYRLSWHVLH
ALQALGYSHISEQDLNHLHVSFASQLEGLGLWHWAVFVLLHIQDNCRRESVVKALIMRQC
TLKRSEANSAKERFLVGQLNVPVKWINEAKALKALYEKRPHQQAWHLLEAGHWNDGHSVI
IKHLAADAIINENYDYLLGLLKKVVPTDRSIMIQDWTTNGQVFLDFINIVKRLENLQHSN
PTVYELEKLYPDVASLCSRVGSVTCCTAKDRLCQSEMAKRTANVMKAVLTLQQQSLYPGK
NVRIPSRLLAPHVGKLPMPEDYGLQELRELTRSYMVELTTA
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggccaacaaaaccccctttggagggtcatccttcggaacaggtaacttctct
tccccacattctacccctcatggtcagcgtaccaatgcctttagtgccaagaccccaggc
acgtctggatttggaacgccaactgcttttggcgctcagactccttctactggtctcttt
gggacgggaaccagtgcagcaggggggctgtttggcagtacaggaaacacctttggccag
ccaccgtcaggtattgggtttggtacttcaaatacctcttctgcagcagggacgctattc
agcagtacatcaaatgcaggaactactggactattctcaactccatcaacttcaacatca
tttggtgcaggaggatttggagctgccaaaccatttggagcagccccttctaccggtctt
tttggccagactgctgcagccacagcaccatttggccaggcagctgcaggagcaagtagc
ctgtttggtggtggagcatcatcaggattgtttggtgccactgctcaaagtggtaccacg
gtcaaattcgctccggtgacaagtacagacacaatggttaaaagtggagttacaactaac
gtcagcacaagacacctggttattacagccatgaaggaatatgaaaataaatgctttgag
gaattgcgaatggaggactatgcagccaacaggaaaggctcatctggttccagcctcctt
ggtcatggtatgacccaagtagacaataaacctgccaatctatttggtcaacaacaacaa
gctgctgcctcgtctggagccggattcacatttgggcaaaacaaaccaacatttggaaca
gggacatccacttttggaaatgcatctggaagtttgtttggtgctcagcaacaacagcag
gctgctggcttgtttggtcagaaggcaggtggatttggtacatctagtgcgccgggagca
tccctattcggagcaacaagcacctcggcatttggacagagtaaccaggctaataagggt
ttatttgggcagacagctacaacacagagtactggcctgtttggatccactcctgcagct
tctggtacaacaggctttgggactggcttcggcaacacggctttcaatcaaaatcagcca
accagcctatttggagccaaagcaggctttggaaccactaccactagtacagggctaaca
ctgggttctactacaggtacagggctgttcggtcaacaaaataagacaggtctgtctctg
ggaactggcgcttcaactggctttggcttcggtgccactcccaaccagtctgccagtctg
tttgcaaacaaaggaacgacaggttttgggggtctaggagctggcattggcacagggctt
ggtacaggatttggggcaaccaatactggcacgtcattgtttggcgccgctagtaaacct
accactctaggtggacttggtggatttggaacaacatcgactggtctaggtggtggattt
ggaactgggactggcttgaacctaggaggagcaactacagggctgggaaatgccacagcc
aatctgacggttcaggatgcacaggctcagcagcaacttttagcaatctttaactcgcca
ttcggagataatcctctcttcagaaacagactcacagattctgataaaagagaggatata
ttgaaaccaacaagtaaagctgctcagaaagcactaagctcacctcttcaacacaaggta
tcatcaagaccctctgctaagcttcgtcctaagcctctaattcaaggtgtctctcataag
tcaaagctgtttgatgggctagatgatgaggacctgactcttaatactgagatgtttgta
ccaaggaggagtgtcaagaaactcgtcattaagaagaaagacgataaatccatggaggag
gatcatctgttgaattccagtcgctctttggcacaagaagagactcttctatccccactg
ccaacttatccgagcaacccttcctcaaaaccatctccaaaccagagacagggttctctg
gacaatgaggaagtattagaaacacccggaggtaccagactattctccaaaccccagtca
catcaaaatgatatcccgacaacatcaagtccacggaagcaagaggatccagactgcacc
atcactgacctgaacgtccaatccaaaccttccagtaagctcaactctagtgagctatcc
tccaccagtgatctagaccactcctccctgccagatatccaagacgatcaggagaatact
cctccacctaaccctgctggtgttacattgagacgatcagggtactataccatcccaccc
cttgaggacctgggctcattgatgggtgagaatggagagtgttatgtggaggatctgacc
atcggacgcagtggatatggaagcgttttcttccctggatttaccgatattgctggactg
aatctagatgagatagttcattttcgacgtaaggagattacggtctacccagatgacact
accaagccagatgtgggtcaagggctgaataagaaagcagaagtaacactggatcatact
tggccaactgataagacttcccgcaaagctattacagatactgagcgacttacagctctg
aattatgaggacaagctggagaaagctacagccaagctaggcgctaagttcattgaatat
cgacccaaaactggatcatgggtcttcctggtccaacatttctccaagtatggactgtca
gatagcgatgaagatgatgaagcgccctcacaggatccaaagaaacagaaaacgcagaag
caaccaggacacaagccaacaggagcaaaaaaagtaccaaccaagccagcggtaaaacag
cctcctaaagtgggcctggatagtcgtagccagccaattagagagcagcaggaggaagaa
ccaatgggagatgatattgatatggagatgcctggtgattcaccaatcagagggctcggt
gggttctatcttaacggacacgtagaagcagccgatactaaccagcgggggttgtctagt
gatcaggaggagctggaagagggtcttgatcatgcagcatcttcacatcgtcttgctaat
gtcttaggaatgaactctcatcgcttgcaggtcatgaagggctcattctttgctgatgat
gaaccggttgaatatgattatgctttacgctcagctccatcccagcctagaccctcgttc
tttgactctccatctagaggatcccccattcctataatggaagagtcctatcaagaaaga
ggattgaataggatcatgggaggtggagtgttgtggcctcgtcccatgggtagtccagcc
aaatatctggctggtatgggccctacagcagacgtcagagctagccccacacctagggct
gttaaggatgaactgcttgacccttcagaccattatgtgtctggtttatttgctgctcct
aaacaataccctgccttcactggtccccatcattatccaagtggaatgacccaagaccga
ccctctagactcgttggatctcgccctcgtcagaccatcttaccactcaagcagtcagtg
atatgtggtaaggtaccctgcatagcggatgctggcttggtcatgagtagatccttcaga
gtgggttggggacccaactggactctggtgcattctggaaaagctgtcggacaacgcatg
agtgctctagatatcaagcaggaaccagccgcctttcccctcctgacagctaaacaaccc
agcaagtcatccctagatgcaaccccattcactatcactgtagagaagctcaacctagcc
cctcatctactgggtgctgacagcaaggttctggatcttcatgagcgatccctaggagta
cagcttcaccacagcgtctgttctactagccagacatgccccgtgtttgcccctaagcct
ggggtagattgtttacatgactttgctaagacagccatgaaggattgccaggaaaggctg
actgctgatgagactaccttagaacatagccagctggtatggaaactcatggtagcactc
tggggacgcttaccggatgaagatcaacaggagcttgatccatctggttacccgttccac
aaggccagaagggaagcgttctcacgatggcttgaatctggctcagagaagagaatcaac
agagaggttcaggactcgaagttcaaggatatgggacacattgaagcagtgttctcgtta
ctgactggacatcaaatcagcgcagcatgtgcagcagcccaaaggtcaggtgaccacagg
ctagctcttctattggctcaggcaggaagtacccaagaaatcaaactgttaatcacaaag
cagctcagcgattggcatgaaatgggcgttgataagttcatagctcctgaatatctacaa
gtgtatgctctactggctggccagcttgtatggcaatcatcacataatagcatcaataca
tgtcagaacttggactggaagagagccctcgctgttcatctctggcatgcttgcaaacca
gtagcatccatccaggatgctctcgcagagtttgataaaggtttccatggagaatcaact
ctgggtcgctactgcccagtgccccgtcccccgtatatggagaataatcccgaggtatac
ccggaggatggagatatggaatatgaagagggggagacggatggctacacggtgtgggat
atgtgttatcatctagtcaagctatatactgatcatacacatagattggagagagtattg
gcaccaactacacatacagcataccagttggactacaggctcagctggcatgttttacat
gctttacaagcgttgggttactcccatatctcagagcaggatttaaatcatcttcatgtt
agctttgcctcacagcttgaagggcttggactatggcactgggctgtctttgttttgctc
cacattcaagataattgccggcgagagtctgtggtaaaggcgctcataatgcgacaatgc
acactgaagagaagtgaagccaattctgctaaagaaaggtttcttgtcggtcaactcaac
gtgccagttaagtggatcaatgaagctaaggcgttaaaggctctgtatgaaaagcgtccc
catcagcaggcctggcatctgctggaagctggtcactggaacgatggtcactcagttatc
atcaaacatcttgctgctgatgctatcattaatgagaactatgattatcttttgggtctg
cttaaaaaggtggtgcctacagaccgttccattatgatccaagattggacgactaatggg
caggtcttcttagatttcatcaacatagtaaagagattggagaaccttcagcacagtaac
cccacagtgtatgagttagagaagttataccctgatgttgcatccttatgtagccgtgta
ggaagtgtaacatgctgtacagccaaggatagactctgccaatcagagatggccaaaagg
actgctaacgtcatgaaagcagtacttactctacagcaacaatcactgtaccctggcaag
aatgtgagaataccatctcgtctgctggctccacacgttggtaaacttcccatgcctgaa
gactatggactacaagagcttcgagaactcactcgcagctatatggtggaactcactaca
gcgtga
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integrated database retrieval system
