Luidia clathrata (European starfish): 117293462
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Entry
117293462 CDS
T10152
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04137
Mitophagy - animal
arun04140
Autophagy - animal
arun04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117293462
04137 Mitophagy - animal
117293462
04148 Efferocytosis
117293462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
arun03000
]
117293462
Transcription factors [BR:
arun03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117293462
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_HIF1A
PAS_3
PAS
PAS_9
HIF-1a_CTAD
PAS_4
HIF-1
Motif
Other DBs
NCBI-GeneID:
117293462
NCBI-ProteinID:
XP_033631701
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All DBs
Position
1:22227090..22256265
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AA seq
867 aa
AA seq
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MKMATMTAQPPKEKKRRNSEKRKLKSRNAARTRREKETSIFYELAHELPMPHSMCAQLDK
SGIMRLLLSFLNIRKFAPKAIKSEPVDTDGEESALSIDSLIDNYYLKALDGFAMILSQDG
DIIFISENVTQYMGLKQIDLMGQSIYDYSHPCDHDEIREHLSDHPRLNIIKSSKSKQKQQ
ERHNFIIRMKCTLTAKGKIVTQKAAIYKVVCCKGLLKVSPSEVTTSGYRLPEVSCVSLIA
MPIQHPANIEIPMDKQTFLTRHSMDMNFTYCDERIKDLLGYDPDDLVDKSFYDFYHAMDS
HVIEKCHRDLFAKGQASSEKYRFLAKKSGYAWMETQATVIYNSKTNKPQCVVCVNYMISG
VEDDQAVISTHQLDEGIQLSTEEIFVQRPDDLDDDDVFPLYLTGSKSKVANPEDLTYLAP
TPGSAMVLLDFTTPLPNLSKTTEAQELQRQDSQTQDFVPFFPFVALDTIPEDQQSSDGGT
NQEPSQTPDLILPETKSHMRSSRDPLLLDGFMENPAQLDDLSKRAPYISLSDDFDFNCDQ
QLSDAELRDDSWEPVNIFGSNVKNNPCVVSVGSPSVSDDRQDLLSPLPSDGHTGPSTPYS
QISVGSPMTPVKKLCQSMPNLWVTTDDCGDGELSVQSPGKYMWPSPQLQQPSPLVSPTGS
QALDEGNYYIDLNNQSKEFSPQLAVKRKRETQDVQPLFKMARRENQGQEAGASFDGGGSE
MGGAGWKTGKTGVELEAAQPPSDEGMSGLQSLLFQQDGTNINNLFGHSLLLQKVAQQVVN
NANMVPSGNPLLSSNQLSPGGSVGPKHQFPSFLTQPVTVDLKDKASADNTLVNCLLLTSQ
DLDVNTPLQASTGLLQGEDLLRALDVP
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggcaaccatgacagcccaaccaccaaaagagaagaaaagacggaactctgag
aagagaaagttgaaatcacgcaatgcagcacgaaccaggagagagaaagagacgtccata
ttttacgagcttgcccacgagttgccgatgccacacagcatgtgtgcccagttggataaa
tcaggcattatgagattacttctcagtttcctcaacatcagaaaatttgcacccaaagcc
atcaaatcagaaccagttgatacagacggagaagagtcggccctgagtattgacagtctc
atcgataactactacctgaaagctctagatggattcgccatgattctatcacaggatgga
gatatcatattcatctcggaaaatgtgacgcaatacatgggactcaaacagattgacctg
atgggacagagcatctacgattacagccatccctgcgatcatgatgaaatacgggaacat
ctctccgaccatcccaggttgaacatcataaagagtagcaaatcaaaacagaaacaacaa
gaacgacacaacttcatcatcaggatgaagtgcaccctgacggccaaggggaaaatcgtc
acacagaaggcagcaatttataaggttgtctgttgcaaagggctgctcaaagtgtcccca
tcagaggtcaccactagtggttatcgactgcctgaggtgagctgtgtctccctgatcgcc
atgcccatccaacaccctgccaacattgagatccccatggacaaacagaccttcctgact
aggcacagcatggatatgaacttcacatactgtgatgaaagaatcaaagatcttcttggc
tacgatccagacgacttggtggacaaatcattctacgacttctaccacgccatggacagc
cacgtcattgagaaatgccatagagacttgttcgccaaggggcaggcctccagtgagaag
tacagattccttgctaagaagagcggatacgcctggatggagacccaagctacggtcatc
tataacagcaagaccaacaagccacagtgcgtggtttgcgtcaactacatgatcagtggt
gtggaggatgaccaagcagtgatttccacacatcagttggatgaagggatacagttaagc
acagaggagatcttcgtgcaacgcccagacgacctcgacgacgacgacgtctttccactt
tacctcactggatcaaagagcaaagtggccaatccagaggatctgacctacctggcccct
actccgggcagtgccatggtactattggacttcactaccccgctgcccaacctctctaag
actactgaagcccaagagctgcagcgacaggacagtcagacccaggactttgtgccgttc
tttccgtttgtagccctggacacgatcccggaggaccaacagtcatcggatggagggaca
aaccaggagccctctcaaacaccagacttgattcttcctgaaaccaaatcacacatgaga
tcaagcagagaccccctgttgttggatggcttcatggagaacccggcccaactggatgac
ctgtccaagagggcgccctacatctccctgagcgatgactttgacttcaattgtgaccag
cagctgagtgatgctgaacttcgtgatgattcttgggaaccagtcaacatcttcgggagc
aacgttaaaaacaacccctgtgttgtctctgttggctcgccatcagtgtccgatgacagg
caagacttgttgagtcctttgccgtcagatggccacaccggcccgtccacaccctacagt
cagatttccgtgggctccccaatgacacctgtaaagaagctctgccagagtatgcccaat
ctctgggtgaccaccgacgattgcggggatggagaactgtccgtgcagtcgccgggtaag
tacatgtggccgagcccgcagctccaacaaccatctcctctggtcagccccactggatcg
caagccctcgacgagggtaactactacatcgatctgaacaaccagagtaaggagttttct
ccgcaactggccgtgaagagaaagcgggagactcaagatgtccagccactcttcaagatg
gcgaggagggagaaccaaggtcaagaagctggggcgtcattcgacggaggagggagcgag
atgggcggtgcgggatggaagactgggaaaactggtgtggagcttgaggctgctcaacct
ccaagtgatgaagggatgagtggtttacagtcactgctattccagcaggatggcacaaac
atcaacaatttatttggacactccctgctcttacaaaaggttgcacagcaggttgtcaac
aacgccaacatggtaccatcaggtaacccactcctgagcagcaatcagttgtcgccgggt
ggtagtgtcgggccaaaacatcagttcccgtccttcctaactcagccagtgaccgttgac
ctgaaggacaaagcttccgccgataacactctggtaaactgcctgctcctgaccagccaa
gacttggatgtgaacacaccactgcaggcttcaacgggactgctgcagggtgaggacttg
ctgcgggcattggatgtaccttga
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