Luidia clathrata (European starfish): 117293932
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Entry
117293932 CDS
T10152
Name
(RefSeq) exosome complex component RRP45-like
KO
K03678
exosome complex component RRP45
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117293932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117293932
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117293932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117293932
NCBI-ProteinID:
XP_033632314
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All DBs
Position
8:complement(11965614..11974448)
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AA seq
457 aa
AA seq
DB search
MKETPLSNVERDFIIDAIKSGKRLDGRDTYDYRNIKIVFGIERGSCEVHLGQTRVLAQAS
CKAVEPKNARPTEGQLYLNLELSPMASPSFEAGRLSEYGVELNRLLEKCLKESRAVDLES
LCIVAGEKVWQIRVDVHVLNHDGSILDCASVAAITALSHFRRPDVSVVGEAVTIHLPEDR
DPVPLSVHHMPLCTTFAFYEQGKYLLVDPMYKEELVMEGNMVVSMNAHRELCTVQMTGGM
LLLKDQILRCSQIAVIKVGEITELIKKALSNDARARSEGRKFGFAESLPQRRITTSVAKP
EPVDTSESMETAQDVIDRSEPVQVPDTKPKVLDSGFGGIGEGSASTWLIPGDEDEVEEDD
IGDEDVKEFDVMEEEEEQESKESKKRAVEECHSDSSEEEATVTLNEADISNLNTRKAADP
SADLDLSVALKATNPKSVTTREPSSKKKTKRKGKKTK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagacgccgctgtcaaacgttgaacgggactttattatagatgccatcaagtca
ggaaagagattagatggtcgtgacacatatgactacagaaacatcaagatcgtatttggt
atagagagaggtagctgtgaggtacatcttggacagacgagagtgttggctcaagcgtca
tgcaaggctgtggaacctaagaatgccagaccaacagaaggacaactctatctaaatctt
gaactctcaccgatggcttcacccagcttcgaggcaggacggttatcggagtacggagtt
gagctgaatcggttattggagaaatgtcttaaggagtccagagctgtggatttagagtct
ctctgcattgtagctggggaaaaggtttggcagatccgtgtggatgttcatgtcttgaac
cacgatggtagcatcttagactgcgctagtgtcgcagcaataactgccctgtctcacttc
aggaggccagatgtttcagtcgttggagaagcagtcacaattcatctaccagaggacaga
gatccagtgccattgagtgtgcatcacatgccactttgtaccacattcgctttctacgaa
caggggaagtatcttctggtggatccgatgtacaaagaagagttggtgatggaaggcaac
atggtagtgtcaatgaatgcccacagggaactatgcacagtccagatgacaggagggatg
cttctactgaaggaccagattttgcgatgttcccagattgctgtcatcaaggttggtgag
attacagaactcattaagaaggccttgagtaatgacgccagagcacggtcagagggacgg
aagtttggttttgcagaatcccttcctcagaggagaataactacatctgtagccaaacct
gagcccgtcgatacatcagagtcaatggagactgcacaggatgtcatagacagatcagaa
ccagttcaggttcctgacaccaaacccaaagttctggattctggttttggaggaatcgga
gaagggtcagcaagcacgtggctcataccaggggatgaagatgaggtggaggaggatgat
attggggatgaggatgttaaagagtttgatgtcatggaggaagaggaagaacaagaaagc
aaagagtctaaaaagagagctgtggaggagtgccatagtgacagtagtgaagaagaagcg
actgtaacgctcaacgaagcagacattagcaacctaaacacaagaaaagccgcagatcca
tcagctgatctggatctttctgttgccctcaaagccacaaatccaaagagtgtgacaacg
agagaaccatcgtcaaaaaagaaaaccaaacggaaaggaaagaaaacaaagtga
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