Luidia clathrata (European starfish): 117294415
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Entry
117294415 CDS
T10152
Name
(RefSeq) huntingtin-like isoform X1
KO
K04533
huntingtin
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117294415
04131 Membrane trafficking [BR:
arun04131
]
117294415
03029 Mitochondrial biogenesis [BR:
arun03029
]
117294415
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117294415
Membrane trafficking [BR:
arun04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117294415
Mitochondrial biogenesis [BR:
arun03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117294415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1_C_2
Motif
Other DBs
NCBI-GeneID:
117294415
NCBI-ProteinID:
XP_033632693
LinkDB
All DBs
Position
9
Genome browser
AA seq
2993 aa
AA seq
DB search
MANVDKLARAFDALKTHQQGGIGDDSGQRKNNTTLSKKDRISHCTTIADGICAASFRAVA
DFPKFLGIAMELFFAACNDEESDVRLKADECLNKCIKVSMDGNLGRVQLELYKEIKKNGS
SRSLRAAMWRFADMAHLIRPQKCRPYVINLLPCIPKISRRQDDSVQESLTIFMQKVLPVL
GSFLTDTEVKNLMKVFYPNVKHQSAATRRTAASCLTLICHHGRKPAMYFSMLVKTLLMFV
TPVKEDRHIQMLLGVLLCFRHVMPHLATQEVKELGLKGSFGVTKKEEEGGVTSEQLQQIY
EFLLYCTQHSDHNVVTATLETLQQLLRTPPPPLHKLLLTRGGITHKTVFEEDDGKSPEDT
EDSTGGSQVPSLFGADSGLDEDPDTASLATSSSIAGDITSTTSTSDTGIDSEAAVSTMLA
NLPEVPLPSGGEAGYPESLIDDAEVVVNDNEGEYSNVAIGDIDEDSSNQEAIGYLGDQMR
QMSIDRLDVEVGLDARRAGGADLLRVEEMDLQDDTSREDSSTKNSPTTEVKTKKGDIGCY
TDDDYPITHCVRLLCSTYLLTGYSGGTIPDRRVRISAKALALSCIAHMVGLHPRLFFARL
FKSDVSESPEDEQLIRDVLVYMTHSDHQLRAQTTLLVGHLIKSSLIESDYDFTSWCWDLC
QDHLLTDPMSLDYLVSLLSSSLRDESSVTVRSACHAIKLCLFDLCKSHHGNLGLQLTYDL
LELNKCSYWLVQVELLDLLSYTDFKLMQFLENRQQQWAQPTNLTKLKSVQDSVLTDVVLQ
FLGSHDVRVRHAAAEAVVKLIPRLFYPVDYPHQEPLTALAKDQVTQYLDPVIGEAVHYSQ
AQTTAMSEIVIFNSGPEGGRVTIDSALSRIVDFIVKTMNTSSSKFSRFGCCHALCQLSMT
YSVIAHPTAWSCAMCLSPLTKDGSLKSAGRVRNAAGSFGSQGAPVGLEEMSNGSGCGTLP
LILSTLTSSLLLLDLTAHQDALHVAGNILIGVAYHSLKAGISSKPPTVNQSTQGEEESWS
CLQNRLLVPLAAQLMQHVARVLCLCAHVIEGTQPGPPKSQTTLPSLPAGPSLSPIKRRAK
GRDKDTVDPGNTSPNTQIKSQTDKLDNTEEKKSPKSTYGAFYQLPHYMKLYEVMKSAFNN
YRVTLDFSRTDKFAGLLKTSLDSFSQLLEIATMSEVGKYTEELLSYMKSCFTIEPTSTIL
CVEQLLKALFFTNMASSAEIPSPQVARKPGKATRLTSNMKPGLYHDCFEAPYTQYTQSLN
QLGPKMSTTPETEGGNAGLFGWMKSKIDRKGILGKVSGKEKSSVHSYIRLFEPLVIRALK
QYTITSSIPLQQQVLHLLAQLVQLRVNYCLLDSDQIFINFVVKQFEYVEEGQIKDYDTLI
PHIFHFLVLLSYERYHSKAVIAMPKIIQLCDGIMASGQQATTHAVPALKPLVHDLFVLRA
SSKSDSTRELDTQREVVVSMLLRLIHFHQALEMFIPVLLQAHRESEDKWKKLSRQVVDMI
LPLLARQQINLDSLEAIDTLHHLFGVVAPSALRPVDILLKSLLLVPYETGHPTLKQRWLG
MALAILNVLISQSKEETVLSRLRELGLTTDLFVCPLEDERSKEEDIVNANVLPPEEVLAR
FLLQVIGFTVTIKNPVNGSSMQTNPNDIFIYQELSHLLLYLAHMFKSGAFRKVASSMMIM
IRNSRKTCWFTLDQLNCTFLQLTTSHPILVLQWCQVLLLLNYSDQDFWSVILQTPKRQPL
SKSLSSGSLDNLETNHHDHSKGCPEEVARRGGLVLYCDYVCENQADAEPLTWLVVNHINE
IIQLFHEPPVQDVISAIHRNSAASGLFLRAVNLRFVHFSHPCLVKLTLQCLQGIHLSQSG
VLLTILIERFLNTHQLAIARLCDSIACRRVEMLLAGGLHESAAQLSAEELCKLEEYMTSH
KLSQRHPRLSSLLTRFKTAISHQDSTASPSTNRPYTDLTSVIPNKEWFLSVVQQGCFGQT
TASARECSLLLAYLPYEDILATMMTEEFSYPLLEDCFLVGLQRTRSLHPQDYKGCATVPP
ESQGSTKKEAPLDPMLQASCNTLLSHVHTLISIMPSGHKILRMDSRLDSDRTQRGRLTSL
MQDGEWSHRVHELASALVKYLSAMRLLGMVIPSHAEIDIARLAVTCLEVTCWALTHRLNV
SSQNVVLALECMSACLQNQQLFTVIGSTDHMTWVCSAIGCVHQIVKKVNPQRKPFSSVDV
IVEQQSTLKEHQDMQTACQQISELLISFQYSPTSNGYNSLEPLPQFLRKPLRNVVISLAR
LPLVNSYARTPPYACKLGWTPSPREGSVEMPPLPMEYLKEKEVLKEFVIRTNAIGWTSRQ
QFEETWAGLLGVFTAPVIAEDIAPEEEIEHSQSICLAVRTISSLLVNSMLRPQPGNPTNS
SYQQIPRHGHKVLPFLKTPKGKKLLALRWVVQREIQAMASKTVNASIQRPVNELDNMADM
YMNNLEQECDSTNFDLARISVHGIWAINNMLPPMVDEEAEILDENGEVTRPIRTSPVRVP
GNLDVHSCLMFLEGLYGQWLSPMAVPRTPLMLICETVKSVLVISDVFTQRGQYEWMFDTL
LEVNKNHPVEDELVTQYAVPGICKAAAILGLEKDLSEKVSKLLEVTLRSTHLPSRVGALY
GALYILESDAVEEINVFIPVVSDYVARNLHYNSHCSSLASQRHTLAMLTIAFYVIEYYYN
YIKSTDFTRAIMQSCISMASMSDGATSPSVYQAIMRGLERLLLSGLLSTQEAEVLTKLSM
DRLCMPSPLHAMSALGLLLTSMYTQKDKQTQGTDYQSERECESHDPESQVMAMERISVLF
DRIRKGYPSEARAVAQILPACVSDFFSLQDVMNKVIGEFLSNQQPHPQLMATVVFKVFGS
LHSQGQPQGVRDWVMLSLSNFTQRTPVAMAIWSLTCFFISASTNPWIRALLPHIVGRMGR
LEAIDKKYFLVVAKDFYTNQVTEESSKRAFMSTFQSAATTSTDPVYAQLIGCL
NT seq
8982 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtcgataagttggccagggcgtttgatgccctgaaaactcatcagcaggga
ggaattggtgacgatagcggccaaaggaagaacaacacgactctgagtaagaaagataga
atatctcactgtacaacgatagcagatgggatatgtgctgcatcattcagagctgttgcg
gatttccccaagttcttgggaattgcgatggagttgttctttgcagcatgtaatgatgag
gagtcagatgtaagactcaaagcagatgagtgtcttaataagtgcattaaggtttcaatg
gatggtaatttggggcgtgttcagttggagttgtacaaagaaattaaaaagaatgggtca
tcacgtagcctgcgtgcagcgatgtggcgctttgcagatatggcacacctcatcagaccc
caaaagtgtcgcccctatgttatcaatctgcttccttgtattccaaagatctccagaaga
caagatgattctgtccaggagtcactcactattttcatgcagaaagttcttccagttcta
ggttccttcctgacagatactgaagtaaagaatctcatgaaggttttttaccccaatgtg
aagcatcaatccgcagcaacacgacgtacagcagctagctgccttactctgatatgtcat
catggacgtaaaccagctatgtacttctcaatgcttgtcaagaccttactcatgtttgta
accccagtcaaggaagatcgccatatccaaatgttgctgggggtactcttatgctttcgt
catgtcatgcctcatctggccacacaagaggttaaagaacttgggttaaagggcagcttt
ggggtcaccaagaaagaagaagagggaggagtgacatctgaacagctacagcagatctat
gagtttctactgtactgtacccaacactcggaccataatgttgttacagcaactctggaa
accttacaacaactgctacgcacccctcctccaccgctccataaactactactaactaga
gggggcattacacataagactgtatttgaagaagacgatgggaaatcaccagaagacaca
gaagattcaactgggggaagtcaggttccgagcttgtttggtgcagattctggtctagat
gaagacccagacacagcaagtttagcaacaagtagctcaatagcaggagatataacatca
actaccagtacatctgatacagggatagactccgaggcagctgtcagtactatgcttgct
aatcttcctgaagtacctttaccttcaggaggagaggctgggtatcctgaatccctgata
gatgatgcagaggtcgtagtcaatgacaatgaaggagagtattctaatgttgctattggt
gacattgatgaagactctagtaaccaggaggcaattggttatctaggtgatcagatgaga
cagatgtctattgacaggcttgatgtagaggtaggacttgatgccaggagggcaggtggt
gctgatttattaagggttgaggagatggacttacaagatgatacaagcagggaggactct
tcaaccaagaactcccccactactgaagttaagaccaaaaagggtgatataggttgttat
acagacgatgactaccctattacccactgtgtacggctgctgtgttcaacctacttatta
acaggctacagtggtggtaccatacctgatagacgtgttagaatcagtgctaaggccttg
gcccttagctgcattgcacatatggtaggactccacccgagactgttttttgcacgtctt
ttcaaatcagatgtgtcagaatcaccagaggatgaacagttgattcgtgatgtcttggtc
tacatgactcacagtgatcatcaactacgtgcccagaccacacttctagtgggccacctc
atcaaatcttccctgattgaatccgactatgacttcacgagttggtgttgggacctttgc
caagatcatcttctgactgatccaatgagtcttgactacttggtatcattgctgtcctct
tcactcagagatgaatcatctgtcacagtaagaagtgcttgtcatgccattaagctctgc
ctatttgatctatgcaagagtcaccatggtaaccttgggcttcagttgacttatgatcta
ctagaactcaacaagtgttcctattggttggtacaagtggagctattggatctactcagc
tacacagatttcaaactgatgcagtttttagaaaacagacaacaacaatgggcacaacca
acgaacctgacaaagttaaaaagtgtgcaggattctgtcttgactgatgttgtgcttcag
ttccttggaagtcatgatgtacgagtcagacacgctgcagcagaggctgtggtcaaattg
atcccaaggctgttctatcctgtggactacccacaccaggagccattgacagcattagct
aaagatcaagtcactcagtatttagatcctgtcattggggaagctgtgcactattcacag
gcccagactactgctatgagtgagatcgtcatattcaacagtggcccagagggaggaaga
gttactattgactcggcgttgtctagaatcgttgattttattgtcaagacaatgaacact
tcttcttccaagttctccaggttcggctgttgccatgctctatgtcagctctccatgact
tattctgttattgctcatccaacggcatggagttgtgcaatgtgtctttcaccgctcact
aaagatggctcattgaaatctgctggacgtgtgaggaatgcagcaggaagctttggtagt
caaggagcaccagtaggattagaggagatgagtaatggatcaggatgtggtactctacct
ctcattctgtctacattgacatcttcattactcctattggaccttacagcccaccaagat
gctcttcatgtagctggcaacatccttattggagttgcctaccactcattgaaggctggc
atatccagcaaaccccccactgtaaaccaatctacccaaggagaagaggagagttggtca
tgcctacagaatcgcttattggtacctctagctgcccagctaatgcagcatgtagccaga
gttctctgcttatgtgctcatgtcattgaaggaacacagcctggtcctccaaaatcacag
actacacttccatccttacctgctggaccttcattgagtcccattaagagaagagctaaa
ggaagagataaagacactgtagatccgggtaacacttcacccaacacacagattaaatct
caaacggacaaattggacaatactgaggagaaaaaaagtcccaagtcaacatacggtgcc
ttttatcaactacctcactatatgaaactctatgaagtgatgaagtcagcattcaacaac
tacagggtgactctagacttcagtagaaccgacaagtttgccggattgttaaagacaagc
ctggacagtttttctcagcttctagagattgcaaccatgagtgaagttgggaagtacaca
gaggagctgcttagttatatgaagtcttgcttcaccattgaacctacatcaacaatcctt
tgtgtggaacagttgttaaaagctttgttcttcaccaacatggcgagctcagctgagatt
ccatctcctcaggttgctcgtaaacctggtaaggctactcgtctgacctccaacatgaag
cctggcttgtaccatgactgctttgaagctccttacactcaatacacccaatctctaaat
cagttaggacccaagatgagtactactcctgagactgaaggaggcaatgctgggttgttt
ggttggatgaagtctaagattgatagaaagggcattctgggaaaagtgagcggcaaagaa
aagtcgtctgtgcactcctacatacgtctatttgagccattagttatcagggctctgaag
cagtatacgatcaccagtagtattcccttacaacagcaggtactgcacctcttggcacaa
cttgtacaactcagggtgaattactgcttactggattcagaccagatatttatcaacttc
gttgttaagcagtttgagtatgtagaagagggacagataaaggattacgacactctaata
ccacacatcttccacttcctggtgctgttatcctatgagcgttaccatagcaaagcagtc
attgcaatgcccaaaattatacaactctgtgatggaattatggcaagtgggcagcaggca
actacgcatgctgtgccagctttgaagccattagttcatgatctgtttgtgctacgagct
tctagtaagtctgactctactagggagctagacactcagagagaagtagtagtctccatg
ctgctaagactcatccacttccatcaggctctagaaatgtttattcctgtccttctacaa
gcccatcgtgaaagtgaagacaaatggaagaagctttctcgtcaggtggtggacatgatt
ctaccccttcttgcaaggcaacagataaaccttgattccttggaggccatagataccctt
catcatctttttggagttgtagctcctagtgctctacgaccggtggatatactccttaaa
tcacttctccttgtaccgtatgaaacaggtcaccctaccctgaagcagcgctggctgggt
atggccctggctattctcaatgtcctgatctctcaatccaaagaagagactgttttatct
cgacttagagagcttggtcttaccacagacctctttgtctgcccactggaggatgaaaga
agtaaagaagaggacatcgttaatgcgaacgtcttacctcctgaagaagtattggcaagg
tttttacttcaagtgattgggttcacagttactataaagaacccggtaaatggatcctca
atgcaaacaaaccccaatgatatcttcatctatcaggagttatctcatctcttgctctac
ttagcacacatgttcaaatcaggagcctttaggaaggtagcgtcttccatgatgatcatg
atacgaaactccaggaagacatgttggtttactctagatcaactcaactgtaccttccta
cagctgactacatcccatcctatactggtgcttcagtggtgtcaggttcttcttcttttg
aactacagtgatcaggacttttggtcagtgattctacagacccccaagaggcaaccactg
tccaagtccttgtctagtggtagtctggacaatctagagactaatcaccatgaccattct
aaaggttgtcctgaagaggtagctcggcgtgggggtttggtgctctactgtgactatgtg
tgtgagaatcaagctgatgctgaacccttaacatggctggtagtcaaccacatcaatgaa
attatacagctatttcatgaaccacctgtgcaagatgttatcagtgcaatccatcgtaat
tctgctgctagtggtctgttcctgcgagctgttaatctgagatttgttcatttctctcat
ccctgtctggttaaacttactctacagtgtcttcaaggcatacatctcagccaatcaggt
gttctactcacaatactcattgagcgtttcctcaacactcaccaactggctattgctcgt
ctgtgtgactccattgcatgtaggagggttgaaatgttactagcaggtggtctacatgaa
agtgctgctcagctatcagcagaagaactgtgcaaactggaagagtatatgacttcacat
aagctgtctcaaagacatcctaggttaagctctctactgacacggtttaagactgcaatc
tcacaccaggatagcacagcctctccctcaaccaacagaccctacacagatcttacatca
gtaattcctaataaggaatggtttctgtcggtggtccaacaaggttgttttggtcaaaca
actgcctcagcaagagagtgttcgctacttctagcttatttaccatatgaggacatacta
gccactatgatgacagaggaattcagttaccctcttctagaagactgcttcctcgttgga
ttacagcggacgagatccctacatccccaagactacaaaggttgtgctactgttcctcct
gaatcacaaggatctaccaagaaggaagctccattggatccaatgctacaggcttcttgt
aatactctcctgagtcatgttcatactctcatctcaattatgccatcaggacataagatc
ttaaggatggattccaggctagattcagacaggacacaaaggggtcgattgacatcttta
atgcaagatggagaatggagccatcgagtacatgagttagcctcagcattggttaaatac
ctgagtgctatgagattactaggaatggtcatacctagtcatgctgaaatagatatagct
agattagcagtcacatgtctggaggtaacttgctgggcattgacccatcgattaaacgtc
tcatctcagaatgtagtcttagcattggaatgtatgtcagcctgcctacaaaaccagcaa
ctcttcactgtgataggctcaacagatcacatgacatgggtatgctctgccattggctgt
gttcatcagatcgtcaaaaaagtgaacccccaaaggaagccgttttcctcagttgatgtt
atagttgagcagcagagtacattaaaagaacatcaagatatgcagactgcctgtcaacag
atttcagaacttctaatcagctttcagtactcaccaacctccaatggatacaactccctt
gagcctctcccgcagttcctgagaaagcccttaaggaatgtagtgatcagtctggccagg
ttgcccttggtcaatagctatgcacgtactcctccatatgcctgcaagctgggttggact
cccagtcctagggaagggtcagttgagatgccaccactgcccatggaataccttaaggaa
aaggaagtcttgaaggagtttgtcatcaggactaatgccatcggttggacatctagacag
caatttgaagagacctgggcagggttattgggagtgtttacagctcctgtcatcgcagag
gacatagctccagaggaggaaattgagcacagtcagtccatctgtcttgcagttcgtacc
atatcctccctgctagtcaacagtatgctccgccctcagcctggtaaccctactaacagc
agctatcagcaaatacctcgacatggccataaagtcctgccattcctcaaaacacccaaa
ggaaagaagttattggcgctacgctgggtggtacaaagggaaatccaggcaatggcttct
aaaacagtgaatgcatccatccagaggcctgttaatgagttggataacatggctgatatg
tacatgaataacctagaacaagaatgtgactcaacaaactttgatttggcaaggatatct
gtacatggcatctgggctattaacaacatgcttcctccaatggtggatgaagaggctgaa
atactagatgagaatggtgaagtaactagaccaatccgtacttcacctgtcagagtgcct
ggtaacttggatgtccattcctgtctgatgttcctagagggcttgtatggtcagtggtta
tcaccaatggctgtcccacggacaccacttatgctgatatgtgagactgtcaaatcggtg
ttagtgatatccgatgtgtttacacagcgaggtcagtatgagtggatgtttgatacactc
cttgaagtgaataagaatcatccggtagaagatgaacttgttactcaatatgctgtgcct
ggaatatgtaaagctgcagccatcctaggcctggagaaggacttgtctgagaaggtgagt
aagcttcttgaagtgacactacgtagtactcatctacctagccgtgtaggtgccttgtat
ggagccctctacattctagagtcagatgctgtggaagaaatcaatgtctttattccagtg
gtatctgattatgtggcacggaaccttcactacaactcacattgcagtagtcttgcaagt
caacgacacactttggctatgttaacgatagccttctacgtcattgagtattattacaac
tacataaaaagtactgacttcacaagggccataatgcagagttgtatatcaatggcatca
atgagtgatggagctacttcacctagtgtctaccaagctatcatgagaggattagaacga
ttactcctctctggtttactctcaactcaagaggctgaagtactcaccaagctcagtatg
gacaggttgtgcatgccatctcctcttcatgctatgtcagcattgggattactgttaacc
agtatgtacactcagaaggacaaacaaactcaaggaaccgactaccaatcagaaagagaa
tgtgaatcacatgaccctgagagtcaggtcatggcgatggaaaggatttcagttttgttt
gatagaatccgtaagggttaccccagtgaggctcgtgctgtggctcagattctaccggca
tgtgtcagtgatttcttctcattacaagatgttatgaataaagtgataggagagttcctg
tccaatcagcaacctcacccccagctcatggctactgtggtcttcaaggtgtttggtagt
ctccatagtcagggccagccacaaggagtacgagactgggttatgctgtccctctctaac
ttcacacagcgtacaccagttgccatggcaatatggagtttaacctgctttttcatcagt
gcttctaccaacccatggattcgagctctattacctcacattgtaggcagaatgggacgt
ctggaggcaattgacaagaaatacttcctggtggttgccaaggacttctacactaatcag
gtgactgaagaatccagtaaacgagccttcatgtcaacattccagtctgctgctacaaca
tctactgatcctgtctatgcacaacttattgggtgtctgtaa
DBGET
integrated database retrieval system
