Luidia clathrata (European starfish): 117294666
Help
Entry
117294666 CDS
T10152
Name
(RefSeq) nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117294666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117294666
03036 Chromosome and associated proteins [BR:
arun03036
]
117294666
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117294666
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117294666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF4485
Trans_coact
Polysacc_deac_1
Motif
Other DBs
NCBI-GeneID:
117294666
NCBI-ProteinID:
XP_033633061
LinkDB
All DBs
Position
9:3210181..3230729
Genome browser
AA seq
1026 aa
AA seq
DB search
MAGIHRKDDEHGYQSRVERGPYQTRRSDAGDRPLSVSFQEPPDSTLGFIYQYSQRQSQGF
NPDKMNEAVDKQRNLRLGQREGSRLSHGGLESSPLARDKMMSRTLNKDRLTTRSPGLLDQ
TAGKSHTPGVRQELPHTPGSALKHSKYTPRKPPMGSSQFDVSDLMGQTPNRSMLTPARTF
NLSMLDQSRLNSLFPATPVHPSNGALEPSAVQTPGGVTEDFTTTNMNLLLVEDPGVAASE
GLFEEFMSCFTNHQSPTDVFTLVAKYQQVCVEQVDMLNNLVRKAGLSSSYGVPKKFARTV
EVLRLLEQEKCTWRLIGSLYQDRQAVLEDFEDENMDVGVKTSKHSEKNIMEALFQRDSDV
RQNQIIVDWLEENSRDSLRYGYDRAEFYSKSVCWENTLHSLQQQVTSGQHQSLPHLDPDA
PIREKTPLADLDKEDEVRLFSEVFSNIRAGLMEEAQRLCRKCGQSWRAATLEGWRLYHDP
NIKGASSGDLERIVGNKHRDIWKSVCWRMSEAEMFNVYERAIYAALSGNLKELLPACNTW
DDCLWAYFKVLVDRQVEQEIRENLTISRDMDDLPASYFDKELTAFRIFQELQSHPKQIVE
LQSKERHHVIQKYIILGDIDALIEEMGEWLSDDVSRPSHHLVRFMAHVVLFLRSLGLQTK
EEICVAIIEAYVKDLIEEKHKKLVATYTAQLPYEMQVSWYARFLEGIHDKDERQQCLQLA
EEAGLDVAQITKTVVENIRTRDQTDFMDSNELSSAREAATSEEDRRKIEATDWLMFDPSQ
RAEALKQSNAIIRTFLACKKHEAAKEVFNKVPTDSIDLIYRNWQARAGREMLPAVDKNAI
KEYLCIKAYLDAFDSFNDWFEHYHNKRPLERLMPENPNFHEKVRFEHEQKEYELELERWH
QALNQQSKRVKECIFNVLLFVNGGWMVDQTMTDEDETEDEAMRQKQLEDLRKLCLPMLCS
LLYTVLHTSGQYQDCVALADIIASEEYQLYKVFSRQELQQFLTKLRESSLLLLNQNLDPL
GYELGS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatccacagaaaggacgatgagcatggttatcagtcgcgggttgaacgtggg
ccgtatcagacgcgaagatcggatgctggggacaggccattatcagtgtcgtttcaagaa
ccacctgactcaacattgggattcatttaccagtattcccaaaggcagagccaggggttt
aatccagacaaaatgaatgaggcagtggataaacaacgcaacctccgccttggacaaaga
gagggcagcagactgtctcatggaggcttggagagttcacctttagcaagggataaaatg
atgagccgcacgctaaacaaagacagattgactacaagatctcctgggttactggaccag
acagcagggaaatcacacactccaggcgtacgacaagagttaccacacacaccaggcagt
gcgcttaaacacagtaaatacacaccgagaaagccccccatggggtcgtcccaatttgat
gtttctgacctgatgggacaaacacccaacagatccatgttgacaccagcaaggacgttt
aatttatccatgttggatcagtcgcgtcttaactccctcttcccggcgacgcccgtacat
ccttccaacggagccctggaaccatccgccgttcaaacgcctgggggtgtaacggaggat
tttacaactacaaatatgaacctgctgttggtagaagacccaggagtggcagcgtcagag
ggactattcgaggagttcatgagttgtttcacaaaccaccagtcaccgacggatgtcttt
acactggttgcaaagtaccagcaggtgtgcgtggagcaagtggacatgttgaacaacctc
gtccgaaaagcaggtctcagttcttcctatggtgtccccaagaaatttgctcgtacagtt
gaagtcctacgtctactggaacaagagaagtgcacgtggcgtttgattgggtccctttac
caagacaggcaagctgtacttgaggactttgaggatgaaaatatggatgttggagttaag
acctccaagcacagtgagaaaaacatcatggaagcacttttccagcgagacagcgacgtc
cgtcagaaccagattatagtcgactggcttgaagagaactccagagattctttgagatac
ggctatgaccgagctgaattctactccaagtctgtctgttgggaaaacaccttgcacagt
ctacagcagcaggtaacttcaggtcagcatcagtctttgcctcacttggacccggatgca
ccaatcagggagaaaacacctcttgccgatttagacaaggaggatgaagttcgtcttttc
agcgaggtcttcagtaacatccgagcaggattgatggaagaagctcagagactgtgtcgg
aaatgtggacaatcctggcgcgctgcaacactagagggatggcgtctgtatcatgacccc
aacatcaaaggtgcttcatcaggcgatctagagcgaattgtagggaacaaacatcgtgat
atctggaagtctgtctgctggaggatgtctgaagctgagatgtttaatgtctatgaacgt
gccatctacgctgcactcagtgggaaccttaaagagcttcttccagcttgtaatacatgg
gacgactgcctgtgggcctactttaaggtgttagtcgaccggcaagtagaacaagagatt
cgggagaatttaaccatcagcagagacatggacgatttgccggcctcgtattttgacaaa
gaacttacagctttcagaattttccaagaactgcagtctcacccgaagcagattgttgag
ttacagtccaaagagagacatcacgttatacagaagtacatcatccttggcgatatcgat
gctctgattgaggagatgggagaatggttatcagatgatgtcagccgaccatcacatcat
cttgtacggtttatggctcatgttgtgctcttcttgagatctttggggcttcagacgaag
gaagagatttgtgttgccatcatcgaggcttatgtcaaggatttgattgaagagaaacac
aaaaagctagtagcgacatacacagctcaacttccatatgagatgcaggtatcgtggtat
gctaggttcctcgagggtatccacgacaaagatgagagacagcaatgcttgcagctagct
gaagaagccggacttgacgttgcccaaattacgaagacagtggttgagaatatccgaacg
agagaccagactgacttcatggattccaatgaactctcttcagctcgggaagctgccacc
tcagaggaagaccggcgcaagattgaagcgacagattggttgatgtttgacccgtcccag
agggcggaggcactcaaacaaagcaacgctatcatcagaacattcttagcctgtaagaag
catgaagcagccaaagaggtcttcaataaggttccaactgactccatcgatctgatctat
aggaattggcaagccagagcaggacgagagatgttgccagccgttgacaaaaatgctatc
aaggagtatctctgtatcaaagcttacttagatgcgtttgattctttcaacgactggttt
gaacattaccacaacaagcggccattggaacgtcttatgccggaaaacccaaacttccat
gagaaagttcgctttgagcatgagcagaaggagtatgagcttgagttggaaagatggcat
caggctcttaatcagcagagtaaaagagtcaaggagtgcatcttcaatgtcttattgttt
gtcaacgggggctggatggtcgaccagacgatgactgacgaagatgagactgaggatgag
gcgatgagacagaaacaacttgaagatttgcgtaaactgtgtctccccatgctgtgttct
cttctctatacagtattgcatacatcagggcaatatcaagactgtgtggccctggctgac
atcatagcatcagaggagtaccaactctataaggttttcagcagacaagagctgcagcaa
ttcctaaccaagctccgggaatcctcgctgctcttactcaatcagaatctagatccactc
ggctatgagctgggatcgtga
DBGET
integrated database retrieval system
