Luidia clathrata (European starfish): 117294810
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Entry
117294810 CDS
T10152
Name
(RefSeq) E3 ubiquitin-protein ligase RMND5A-like
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arun04121
]
117294810
Enzymes [BR:
arun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117294810
Ubiquitin system [BR:
arun04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
117294810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
STATB_N
ApoLp-III
Zn_ribbon_9
DUF6674
DUF4618
zf-C3HC4
zf-RING_5
DUF7605
XRN_M
Motif
Other DBs
NCBI-GeneID:
117294810
NCBI-ProteinID:
XP_033633232
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All DBs
Position
9:19913543..19925609
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AA seq
391 aa
AA seq
DB search
MDACLSVQKEVDKVLGKFDGIKAHSQRTLEELIDSLNNIRHELSSAEQHSERNRVHQLIL
NSAQNRTKDILTRVSNEHKDIHSSVSKVGKAIDKNFVSDLIQLNAEQTFESPERMHLLNE
VICEHFLRQGMLDIAENLTEEAGLDMLDSAKEPFLEINQILEALKQKDLQPALIWASRHR
EQLQAMNSSLEFKLHRLRFIELVCQGGVKQQEALAFARNFSLFAQGHTKEFQVLMGSLLY
IRQGLEHTPYSHLLDPIQWDDISDVFTQDACSLLGLSVESPLTVSISAGCVALPALLNIR
QVMQQRQCQVVWSAKDELPIEVDLGEAHRYHSIFACPILRQQTSDTNPPVKLACGHAISR
DSLNKLTNGNKIKCPYCPIESTPAESKQLYL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctgtctaagcgtccaaaaagaagtggataaagtactcggaaaattcgatgga
atcaaggctcactcacagcgcacactggaagaactaatcgacagtttgaacaacatcagg
catgagttgtcaagtgccgaacaacacagtgaacgcaacagagtacatcagctgatcctt
aactccgctcaaaacagaacgaaagacatcttgaccagagtgagcaatgaacacaaagac
atccacagcagcgtctccaaagtaggcaaagccattgataagaattttgtaagtgatctg
atccagttgaatgcagagcagacgtttgagtccccagagagaatgcaccttctgaatgaa
gtcatatgtgaacatttcttacgccaagggatgttagacatcgcagagaatctcacagag
gaggctggtttagatatgttagattcggcaaaagaacccttcctcgagatcaaccaaatt
ctagaagcccttaaacagaaagacctccagccagcattaatttgggcttcaagacatcgg
gaacagttacaagccatgaacagttcgttagaatttaagcttcatcggttacgtttcatt
gagctggtctgccagggcggagtcaagcaacaagaagccctggcgttcgctaggaacttc
tccctgtttgcgcagggtcacactaaagaatttcaagttttgatgggaagtctcctgtac
attcggcaaggcctagagcatacgccttactctcatcttctagatcccattcaatgggat
gacatctctgatgtcttcacccaagatgcctgctccctgctggggttgtctgtagaaagc
cctctaactgtcagcatatcagcaggttgtgtagctcttccagcccttctcaacataaga
caggtcatgcagcaacggcaatgtcaggtggtgtggagtgctaaggatgaattaccgatt
gaggttgatctaggggaggcccatcgatatcattccatctttgcgtgtccgatcctacgg
caacagacgtctgataccaaccctccagtcaagcttgcttgtgggcatgccatctcaaga
gactcactcaataaactgaccaacggaaacaagataaagtgtccatactgtcccattgag
tcaacaccagcagaatcaaagcaactctatctctag
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