Luidia clathrata (European starfish): 117294827
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Entry
117294827 CDS
T10152
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
arun Luidia clathrata (European starfish)
Brite
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
90S particles
Other 90S particles
117294827
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GFIT
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NCBI-GeneID:
117294827
NCBI-ProteinID:
XP_033633254
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Position
9:3316865..3360721
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AA seq
1865 aa
AA seq
DB search
MEEEDFPRGRGNQKKVTFLETKSIKRKHEDALFKDDSETSNLEKRRRESKVTIIEEDKDD
DEDESPLKMFEYDEGDENIEEGAEGVIEDGLLSTSEIVPKFSKLRRTTISEGLLVLGAIK
ELHEYEIVVNLPSMMTGYVQITDISASYTKLLEKLGDAQMERMDEVQGIPNLQDLYSIGE
LVLCKVKSAGTTKSGRQHIQLTLDPQAINSQLSPSMLQSGMTVVGSISSKEDHGYVIETG
VAGVHGFLNNSDAEWYMKNSKQEQPLFVSKPIKCQIKEVKSNGRSLVLSTNPAAFSRAKI
RKQDRAPKLPVKRHFSSLLPGAIVNATVTKVIEENIKVSFLNSFTGCIDQFHLKDSSAGT
SLYKEKQMVKACIIFSCPNSKSLGLSLMLQHVDPVNQTQSQLQDLKIGEIIKHSTILRID
KRLGMLVQLHEESRGFVYLPHLSDKKDKITTQGFKVGGIVKVRVLDINLMDKLASVSMKV
SILKQPFLGYYDIQPGAKVEGTVSAVTDKGLRIQISPHVAGFVPNLHMADVIIHKPSSKF
QIDQALQLRVLVVDANKRRLLLTHKKSLVESTLPVITSYDQPEVDMLLHAYIVTIKDFGY
LVRFYNDVTGLIHSSELCIGNEAVEEGAYAVGQVVKCRVTKTYPVEDRRISLSLNLTKKP
TEIKEAGYSNPEMGQLTDAKVTRVTDYGLDVTLQPGGARAFLPKMHLSDFTENCGPMLAC
YERNDIISNVMHWSFSTRTNHAVVTQKPMLIQAKQNKELIKEFNELQSDAVVMGVVKRVM
KYGLFIELPNNLVGLAPISAMSDDFTTNSDAFQVGQTLRANVTEVVVEKSRFLLSLQSSM
CHPKKGEDRLLMEQYFNERDVISKKLATKEAWKQLLKPKICQQVEVEVSQTTPVGLVCQL
PNDVNGFIDSSYIGENEAEEGSKVSAYVLNVDLKEKFVELCLDPRTIHLDVKVSQQQLSK
KSKNSDVAEATVAMVKDDFVMVCLNSSGRIAYIPGRRHLNDIRVGDDCLAVGQTINVIKQ
RFINNRVFTEQFVSQKKNTTKPSAPQTVEKAVPKKTSKKELKNQAKKEPKKESRKERKMK
TESADINAEGLQLGQTVTAVVKSILECQMNVRVNDVIMGRVHALEVRHFMKPTKSPFKGM
KVGQELKAKVIGYLQVKDHHYLPITHTHGVKMAVDLTLIQSKLDDDDFKTEDLTLEKQLL
SYKPEQTVTCVVQKYVQNVLWVAVTGTLQGKIFQLNLSKSLSEVQKPAKLFKPGAVRKAK
VVKIDMTHKVLELTFVGTGSSELTPGMILNGFITRIIPGVGLVIQLPFCHHGRVSLTDLR
DRFIKDPLAGFKKKQCVRCCVMAVPKKDNAVLSLRASDTWEDHAAVIDKDIRSAEELAVG
DIVKGYVSSCTKVGVFVSLSRKVFGRIQMKNLSESFVKDPGPLFPTGMLLTVAVLSVNKK
SGKIELSSASTATGAEDPVPAKLRVTRKKNLKRKRNISEGEEDIDSGLEEPETLSDTEVE
VIQKPREGAPVARLNVDSGFSWDSSHAPDAKKSKKTVLRNEEESSSEESDVEEEETVVKE
PSQVKSKKEKEAIEKAEEELLFKTECELMDEDKTPQTSDEYDRLVLSSPNSSLVWIRYMA
FYLQSAEIDKARAVAERALKTMSFREESEKLNVWVSFLNLENLYGTEESLLKVFERALKH
CEPIKVFQNMVNIYVRTEKLEQAEQLYNTMVKRFNFNKDVWISYGYFLMKSGRHGAAHKL
MQRSFKSLTQKEHVDVITKFAQMEFKFAEAERGKTMFENVLSNYPKRTDIWSVYLDMMIK
EADVEAVRHLFERVIHLSLSAKKMKFFFKRYLEFEKKSGTDASVVEVKRKAVEYVESKME
VVADS
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaagacttccctcgtggccgaggcaaccagaagaaagtgacattcctggaa
acgaaatccatcaaaagaaaacatgaagatgctttgttcaaggatgacagtgagacaagc
aacttggaaaagaggaggcgtgagtcgaaggtgactatcattgaagaggacaaggatgat
gatgaagatgaatcaccactcaagatgttcgagtatgatgagggtgatgagaatattgaa
gaaggagcagagggagtaattgaagatggtcttctgagcacatcggaaatagttccaaag
ttctccaaactcagaagaacgacgatatccgaaggtttgttggtgctgggagcaattaaa
gagctgcatgaatatgagatagtggtgaatctacctagtatgatgacggggtacgttcag
atcactgatatctcagcgtcttataccaaactactggagaaactcggagatgctcagatg
gagagaatggatgaggttcagggaataccaaatctgcaggatctttattccattggcgag
cttgtcctgtgtaaggtcaaatcggcagggacaaccaagtctggacgtcagcacatacaa
ttaacccttgacccacaggctattaattctcaactcagtcccagcatgctccagagtgga
atgactgttgttggaagcatatccagcaaagaagaccacggttatgtaatagagaccggt
gtagctggcgttcatggcttccttaacaacagcgatgcagagtggtacatgaagaatagt
aaacaagagcaaccgctgtttgtctccaagccaatcaaatgccagataaaggaagtgaag
tccaatgggagatctctggtactctccaccaacccagctgctttttctagagcaaagatc
aggaagcaagatagggccccaaagctgccagtaaagcgtcacttctcttcactgctacca
ggcgccatagttaacgctacggtaacaaaggttatcgaagaaaacatcaaggtcagcttc
ttgaattcttttactggctgcatcgatcagttccacttaaaagacagcagtgccggtacg
agtttatacaaagagaaacaaatggtgaaagcgtgtatcatattcagttgtccaaacagt
aagtctcttggcctcagcttgatgctccagcacgttgaccccgtcaatcagacgcaatca
cagctccaggatttaaagattggtgaaatcatcaagcactcaacgatcttaagaattgat
aagaggcttggcatgttagttcagctacatgaagagtccagagggttcgtttatctccca
catttatcggacaagaaggacaaaattacgacgcaaggcttcaaagtaggaggtatcgtg
aaagtccgggtactggacatcaatttgatggacaagttggcatctgtatccatgaaggta
tctatcttaaagcagccattcctcggctactatgacattcagcctggtgccaaagtggag
ggcacggtgtcagctgtcacagacaaaggtttacggatacaaatctctcctcacgtcgca
ggctttgtgcctaacttacatatggcggatgtgattattcataaaccaagtagcaagttc
caaattgatcaggctctgcaactcagggttctcgtggtggatgcaaacaaacgtcgtctt
ctcctgacccacaaaaaaagcttagtggagtccacccttccagtcatcacgtcttatgac
caaccggaagttgatatgttgctacatgcttatattgttacaatcaaggactttggttac
cttgtccgtttctacaacgatgtcacagggttgatccactcttcagagctgtgcattggc
aatgaagcggtagaagaaggcgcctacgctgtgggtcaagtcgtcaagtgtcgcgtcacg
aagacatatcctgttgaagacagacgcatctcattgtctcttaatttaaccaagaagccc
acggagatcaaggaggctggctacagcaatcccgagatgggacagctcacagatgccaaa
gtgaccagggtcactgactatggcctagatgtcacgctgcagcctggtggcgctagagcc
ttccttcccaaaatgcacctgtctgattttacagagaactgtggtccgatgctggcatgc
tacgagcggaacgacatcatttctaacgttatgcactggtctttctctactcgcacaaac
catgctgttgtgacacaaaaaccgatgctgatacaagcgaagcaaaacaaggagcttatc
aaagagtttaatgagctgcagtctgacgccgtcgtcatgggcgtcgtcaagcgcgtcatg
aaatatggcctcttcattgagttgcccaacaatctcgtgggacttgccccaatatctgcg
atgtcagatgactttaccaccaactcggatgcattccaagtgggtcagaccctgagagct
aatgtgacggaggtagtcgtcgagaaatctcgatttctcttgagtcttcagtcgtccatg
tgccaccctaagaagggagaagatcgtctcctgatggagcagtacttcaacgagagagat
gttatcagcaagaaactggcaacaaaggaagcctggaagcagcttctgaaacccaagatc
tgtcagcaagtagaagtcgaagtcagtcaaacaaccccagtaggattagtttgtcagctg
cccaacgacgtcaacggatttattgatagttcttacattggagaaaatgaagctgaagag
gggtcaaaggtcagcgcctacgtactgaatgtcgatctcaaggagaagtttgttgaactt
tgcctggatcctcggaccattcatctggacgtgaaggtgtctcaacaacagctctccaag
aagagcaaaaacagtgatgttgcggaagcaactgttgccatggtgaaggatgactttgtc
atggtttgcttgaattctagcgggaggatagcgtacatcccgggaagaaggcatctgaat
gatattcgtgttggagacgattgtctcgctgttggacagaccatcaacgtcatcaaacag
agattcatcaacaatcgagtgttcactgagcagtttgtcagtcagaaaaaaaatacgacc
aaaccatcggcgccgcagactgttgagaaagctgtgcctaagaaaacatccaagaaggaa
ctcaagaatcaggctaagaaagaacccaagaaagagtcaaggaaggagaggaagatgaag
acagaatctgcagacatcaacgcagaaggattacaactgggtcaaacggtcaccgcagtg
gtgaaatctatccttgaatgccagatgaatgtgcgagtaaatgatgtcatcatgggtcga
gtgcacgctttagaagtcagacactttatgaaaccgactaagtctccatttaaaggaatg
aaagtgggacaggagttaaaagcaaaggtcataggttatctacaggtcaaagatcaccac
tacctcccgatcacacatactcacggcgttaagatggcagtagatttgacactaatacaa
agcaaattggatgatgacgatttcaagactgaagatttaactctagagaagcagttactt
tcctacaagcctgaacagactgtcacctgtgtggttcagaagtatgtacagaatgtgttg
tgggtggctgtgactggtaccctgcaaggcaagattttccagttaaatctgtccaagagc
ttgagtgaagtgcagaaaccggctaagttattcaaaccaggagcggtcagaaaagccaaa
gtggtcaaaattgacatgacacataaggttttagaactaacatttgttggtactggctcg
tctgagttgacccctggaatgatcctgaatggatttataactcgaatcatccccggagtg
ggtctggtcattcagcttcccttctgtcatcacggcagggtgtctctcactgaccttaga
gaccgcttcatcaaagatcctttggcgggattcaagaagaaacagtgtgtcaggtgttgc
gtgatggcagtgccaaagaaagacaatgcagttttatcattgagagcttcggacacatgg
gaggatcacgccgcagttattgacaaggacattcgctctgctgaggagttagcagtcggt
gacatcgttaaaggatatgtgagcagctgcacaaaggtcggcgtcttcgtcagtttatca
cgaaaagtttttggtcgaatccaaatgaagaacttgtcggaatcttttgtcaaggatcca
ggacctctgtttccaacaggaatgcttcttactgttgcagtgttaagcgttaataagaag
tcaggaaagattgagctctcttcagcgagcactgccactggcgccgaagatccggttcct
gccaaactcagagtgacaagaaagaagaatctgaagaggaaacgaaacatatcggaagga
gaggaggacattgatagcggattagaagaaccagaaacattgagtgacacggaagtagag
gtgatacagaaaccaagagagggcgctccagttgctcgactcaacgttgactctggattt
agttgggatagtagtcatgcaccagatgccaagaagagtaagaagacagtactccgcaac
gaggaggaatccagcagcgaggaaagtgatgtggaagaggaggagacagttgtcaaagag
ccttctcaggtcaaaagcaagaaggagaaggaagccatagaaaaggcagaagaagagctt
ctcttcaagacggagtgtgaattgatggatgaagacaaaacaccgcagacgtccgatgaa
tacgatcgtctcgttctgagttctccaaactcctccctggtatggattcgttacatggcc
ttctaccttcagtcagccgagattgacaaagctagagcagtggctgagagagctcttaaa
actatgagcttcagagaggagtctgagaagctgaatgtgtgggtgtcattcttgaatctt
gagaatctatacggaacggaagagtctctactcaaggtgtttgagagggcgctaaagcac
tgtgaaccaatcaaagtcttccagaatatggtcaacatctacgtccgcacagagaaactc
gagcaagcagagcagttgtacaatacgatggtgaagcgatttaacttcaataaagatgtc
tggatcagctatggttactttctgatgaagagcggacgtcacggtgcagcccacaaactt
atgcagagaagtttcaaaagtctaacacaaaaagagcatgttgatgtaattacaaaattt
gctcaaatggagttcaagtttgccgaagctgaacgaggcaagacgatgtttgaaaatgtc
ctcagcaactatccaaagcgtactgatatctggtcggtgtacctggatatgatgatcaag
gaagcagatgtagaggctgtcagacatcttttcgagagagtcatccaccttagtctctcg
gccaagaagatgaagttcttcttcaagcgctacttggagtttgagaaaaaatctggcacc
gatgccagtgtagtggaggttaaacgcaaggctgtcgagtatgtagagtctaagatggag
gtggtcgctgatagctga
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