Luidia clathrata (European starfish): 117294832
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Entry
117294832 CDS
T10152
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
arun03015
mRNA surveillance pathway
arun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117294832
09122 Translation
03013 Nucleocytoplasmic transport
117294832
03015 mRNA surveillance pathway
117294832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117294832
03041 Spliceosome [BR:
arun03041
]
117294832
03009 Ribosome biogenesis [BR:
arun03009
]
117294832
03012 Translation factors [BR:
arun03012
]
117294832
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117294832
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117294832
mRNA cycle factors
Stress granule specific factors
117294832
Spliceosome [BR:
arun03041
]
Complex C
Other components
EJC/TREX
117294832
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
90S particles
Helicases
117294832
Translation factors [BR:
arun03012
]
Eukaryotic type
Initiation factors
eIF-4
117294832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
UvrD-helicase
TniB
Motif
Other DBs
NCBI-GeneID:
117294832
NCBI-ProteinID:
XP_033633262
LinkDB
All DBs
Position
1:complement(20860244..20868791)
Genome browser
AA seq
401 aa
AA seq
DB search
MAATTRRVLSQEGTNLRFETSESVDVTPTFDAMNLREDLIKGIYAYGFEKPSAIQQRAIK
PVVSGRDVIAQAQSGTGKTATFSISVLQCLDTQVRETQALILSPTRELATQIQKVILALG
DYMSVLCHSCIGGTNIGEDIRKLDFGQHVISGTPGRVFDMIKRRNLRTRSIKMLILDEAD
EMLNKGFKEQIYDVYRYLPPATQVLLFSATLPHEILEMTTKFMTEPIRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD
MPQKERDEIMKEFRAGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGR
YGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacaacgagaagagttttgtcacaagaaggcacaaatcttcgctttgaaaca
agcgaaagtgtcgacgttactcctacatttgatgcgatgaatctaagagaagatctgatt
aagggaatctacgcttacggatttgaaaaaccttcagctatacaacagcgagccatcaaa
cctgtcgtatcgggacgagatgtgattgcacaggcacagtctggtaccggaaagacagct
acattctccatttcagttttgcagtgtttagacacgcaggttcgtgaaacacaagctttg
attctgtctccaactcgtgaattggcaacccaaattcaaaaggtgattctggccctgggt
gactacatgagtgtcctctgccattcctgcatcggaggtaccaacatcggagaagatatc
cgcaagctggactttggtcaacacgtcatctccggcaccccaggaagagtctttgacatg
atcaagagaagaaacttgaggacccgttcaatcaaaatgctgatccttgacgaggcggat
gagatgctgaacaaaggtttcaaggagcagatatatgacgtttatcggtacctccctcca
gctacacaagtccttctcttcagtgccacactgcctcatgagatcctagagatgaccaca
aagttcatgacggaaccaatccgaatcctggtcaagcgtgatgagttgacattagaaggc
atcaagcagttctttgtagcggtagagcgagaggaatggaagtttgacacactctgtgat
ctctatgatacgttgacgatcacgcaggctgtcatcttctgcaatactaaacgcaaggtt
gactggctgactgagaagatgagagaagcaaactttactgtctcttcaatgcacggtgat
atgccacagaaagaaagagatgaaatcatgaaggaattcagggctggagctacgcgagtt
ctgatcacaacagatgtttgggcacgtgggttggacgtacagcaagtgtctctagtcatc
aactacgatctgccaaacaaccgtgaattgtatatccacagaattggtcgttcgggtcgt
tacggtcgcaagggtgttgctatcaactttgtcaagagcgatgacatccgtatattgaga
gatattgagcagtactacagtacacagattgatgaaatgccaatgaatgttgctgatctg
atctga
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integrated database retrieval system
