KEGG   Luidia clathrata (European starfish): 117295092
Entry
117295092         CDS       T10152                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
arun  Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:arun00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:arun04121]
    117295092
Enzymes [BR:arun01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117295092
Ubiquitin system [BR:arun04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117295092
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-rbx1 zf-RING_5 zf-RING_4 RCS1 zf-C3HC4_4 zf-RING_6 zf-LITAF-like IBR_1 Zn_ribbon_6 zf-Nse
Other DBs
NCBI-GeneID: 117295092
NCBI-ProteinID: XP_033633551
LinkDB
Position
9:complement(8657575..8673163)
AA seq 201 aa
MMRRRRSSSDDVQIIDDSPPSFVDLTEESPASTSRGGQTTRSSSRLISSEIVDLTCTDTP
PVVLQPVRSRRTRHIRQARLNSPYSSSSDITIDSDGENEVVHNEIIDLQISPPVSVNRTL
PWTEHAEDMPPTEESPCRKEVKCPVCMESETRIRANGLRLTSTICGHIFCNQCIRSAIGN
QHRCPTCRTKLTMRQIHPIFL
NT seq 606 nt   +upstreamnt  +downstreamnt
atgatgcgccgaaggagaagctcgtctgacgatgttcaaattatagatgattctcctcca
tcgtttgttgatcttactgaagaatctccagccagcacgtcccgtggaggtcaaacaact
cgctcttcatctcgtctcatctcctctgagattgttgatctcacatgcaccgacactccg
cccgtcgttctccaaccagtgagatcaagacggactagacatatcagacaggctcggcta
aacagtccatactccagcagtagtgatattaccattgacagtgatggagagaatgaggta
gtacacaatgagatcatagacttacagatatcgccacctgtcagcgttaatagaacctta
ccatggactgagcatgcagaggatatgccacccaccgaggaaagtccatgtagaaaagaa
gtcaaatgccccgtctgtatggagagtgaaactcggattcgtgccaatggtctacggctg
acatcaacaatatgcggacacatcttctgcaaccagtgcatccgaagtgcaatagggaat
caacaccggtgcccaacgtgtagaactaagctcaccatgcgacagattcaccctatattt
ctatga

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