Luidia clathrata (European starfish): 117295176
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Entry
117295176 CDS
T10152
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arun03016
]
117295176
Enzymes [BR:
arun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
117295176
Transfer RNA biogenesis [BR:
arun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117295176
Prokaryotic type
117295176
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
117295176
NCBI-ProteinID:
XP_033633642
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Position
9:15164569..15171073
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AA seq
311 aa
AA seq
DB search
MNQPISSFVNCGRWTFKAWPVDGCRVQNEEIRVGARPSLKMRGVPCKQRFVSDLNGLFAV
YKPTGITSAFLVNRLKQILFSEQKRQDQDHSHHKTKGISQPSKQLRIGHGGTLDMNASGV
LVVGVGRGTKMLTNMLKGRKRYHAVGCLGSATDTQDALGKVTLQLPLGHVTQDMVEASLE
GFVGNIMQVPPLYSALKMGGVRMSDLARSGEINQPKPARPVTVHNLKCLQFSPPYFTLDV
YCGGGFYVRQLIHDLGKVLGTCAHLVELERTQQGPFTLQHVLQTEEEWTFQNICKAIADF
DETIQPGRLLE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacccatatcatcgtttgttaactgtgggcggtggactttcaaagcttggccg
gtcgatggctgccgtgtacaaaacgaagaaattagagtcggggcaagaccgtccctgaaa
atgcgtggtgtcccatgtaagcagcgttttgtgtccgatttgaacggcctatttgctgtc
tataagccaactggaattacctcagctttcctagtcaacagacttaagcaaatcctcttc
agtgaacaaaaacgtcaagaccaggaccacagccatcacaagacgaaaggaatctcacag
ccatccaagcaacttcggattggacatggtggaacgttggacatgaatgcctcaggtgtc
ttggtggttggagttgggagaggtacaaagatgctgactaatatgctgaaagggagaaag
cgttaccacgcagtcggatgtcttggttcagctacagacacacaggatgcactcggcaaa
gttacacttcagttgccattagggcatgtaacgcaggacatggttgaagcttcgcttgaa
ggatttgttggcaatataatgcaagtaccgcctttgtactctgccttgaagatgggtggt
gtaaggatgtctgacctagctcgctctggtgaaatcaaccagcctaaaccagcaagacca
gtcactgtgcataatctcaagtgcctccaattttcaccaccatatttcactctggatgtt
tactgtggtgggggcttctatgtacggcaactgattcatgaccttggaaaagttctggga
acatgtgcacacctagtggaattggaacgaactcaacaagggccattcactctccagcat
gttttacaaacagaggaggaatggacatttcaaaacatttgtaaggctattgcggacttt
gatgaaaccatccaaccagggaggctcttagagtga
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