Luidia clathrata (European starfish): 117295296
Help
Entry
117295296 CDS
T10152
Name
(RefSeq) sodium channel protein 1 brain-like isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
arun04040
]
117295296
Ion channels [BR:
arun04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117295296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
IQ_SCN5A_C
ATP-synt_F
Motif
Other DBs
NCBI-GeneID:
117295296
NCBI-ProteinID:
XP_033633745
LinkDB
All DBs
Position
10:19193077..19221174
Genome browser
AA seq
1956 aa
AA seq
DB search
MIHTKNSKMTDKSPNPNFKALTKEALVNLKLKGSANNAQPTAERAFSRLSLMSEMEEEEV
ETGKVYDTDLADGKDLPESLGTFPKSLYGKPIEELDAVRHDEQTFCVVGKRFGKSSLFRL
SSTESCFLLSPLNPIRKFMLYVLTNQFFDVFVILTILVNCVFLALDAPKFDPNAEDSVLL
AVAEYVFTGIYTVEMVVKIIARGFILQKKTYLRDPWNWLDFSVIVLAYVTFILEFGGVPV
GNLSGIRTFRVLRAFKTISVIPGLKSIINALLRSAKMLGEVFLLTVFVLAIFALVSLQLY
MGVLRQKCVLNINITAINETEEFYYNFIQNETHWKYWNDEPLVCNNITGVSTCMGDTNYT
CLPDIGKNPNGQYGYTSFDNIGWAMLTCFQIFTLDFWENTYNLVIAAMGGWSVVFFFLAV
MLGSFYLINLMLAVVFLAYTEEMENQGKEKEKKAQQIRENIFNMDAEKLKRLAEKKRRRK
ERRDQMRKLQLQNLEKIEGGGGGAEANDNEGFNANEKMDNDSDNTSKMSQDEIKADTIDD
DKNDDDKSADVSKDDSKSQNGSEDGSNVIMNNPDDTDDGSDLPVPCCPYKSCCVCCLTCC
VCPRGIYRNLRKGQYYCALFVLDPLMDLFITLCILLNTVFLMLDHHNINAEMDNVLDIGN
KVFTVIFTIECGLKLIALEVKFFKGGWNVFDLVIVIFSLMDLFLSSIPGLSVLRTFRLLR
ILKLAQSWTTMRMLIMIIGNTIGALGNVSLVLLIIIYVFAVMGMQLFGANYTEANFNGEI
PRWHFRDIYHSLLLIFRILCGEWIEPMYECMDCSDAAVCIIIFISSFIVGNIMILNLFLA
LLINAFASDSLKKKDEEENRIGLAIAKLKRFAIFIFCCCCKEFRRPSKIGVEGSKDDAMI
EAKGENGTDNTRKASVTKFMVVDEDDRISQISLDNGGQHYKSNGLELTPVRHRNSLVSII
HQPNGSLHDGSIYNGSIHRVSVGNGGMLNGLMQPSSRAHSPVPIGNALMPNGLYSNGPSR
NGSARSIKRPMSHTIYSSIANLQVDNMRDNPSMPAVRNTDSETGEQESSKIVPDQAVEVR
IKSAATQRGDEALVEAGIIEDPVHDCFPKKCDLWCIRKCTCTFCTDPDNSRAFFCWRKFR
ETMCTIIENRVFEGFILLAICASSITLTFEDINLPGNLVLQEILAISNIVFCVIFVFEML
MKWIGMGFVKYFTSFWCWLDFIVVIVAVVSLIGDSLGLSGVSAFKVLRTLRALRPLRAIS
RWQGMKIVVNAVAHAIPAIFNVVVVCVVFWLIFSIMGVQFFKGSFSKCVDENDELLPITI
VNNFTDCINLNYTWKVAKVNFDNIFSGYLALFQVATFEGWLEVIQASVDSRGPDMQPSYE
ASPIAYIFFVVFIIFGAFFTLNLFIGVIIDNFNELKRKYEGDSSFGMFLTSNQKNYYQTM
RRLGVQKPTKQIKQPTNKIQEFFFKLTSSTKFEIVIVSIIFANMIAMTVEHYKQSQEFTN
VLKVFNIVFTVIFTFEMILKWIGYRLHYFRIPWNVFDFIVVTFSLLGILLDDVLSSSFIN
PTILRVFRLIRIGRILRLIKSAKGIRKLLFALAVSMPALVNIGALLFMIIFIFSIIGMAQ
FAYVKKQGAIDDTVNFETWLNSMMLLFRFATSAGWNDVLDPLMTAPPECDPTYMDLPNGN
CGNYIFAALFCFLFLVMTFLVIVNVYVAVILENFSQAHAQEEVGITEDDFGMFYQVWQKF
DPNATQFIMYEQLSTFCDTLEHPLRLEKPNNIKIAGLELPIYDDIKLHCLDVLFALTKRV
LGDVEESEEFKELQAQMSIKFKESFPDRGATEPTTTTLQIKKRGTAAKKIQRAFRRYRLM
VEMRKASTAYRNQQSLEGSRRNSINPDLDSSMTSQTFGQTLTIPSGYGVDRSATPTIPEQ
SYKSDNEAYRVDNDGDDVPTIDASEEIRGNDRDVMV
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgatacataccaaaaacagcaaaatgaccgacaaaagtccgaatccgaactttaaagcg
ctcacaaaagaagcgctggtgaacctgaagttgaagggcagtgcgaataatgcacagccc
acggcagagcgggcttttagccggctcagcctgatgtcggaaatggaagaggaagaggtt
gagaccgggaaagtttatgatacggatctggcggatggtaaagatttaccggagtcgctc
ggaacattcccaaagtctctttatgggaagccgattgaggagctggatgcagtgcgacat
gatgaacagacattctgtgtggttggcaagcgattcggcaagagtagcctgttccgactt
agcagtaccgagtcatgtttcctcctctctcctctaaaccccatcaggaagttcatgctc
tacgtcctcaccaaccaattttttgatgtcttcgtgatcctgactatattagtcaactgc
gtcttcctggcattagatgcacccaagtttgatccaaacgcagaagattcggtgctgtta
gcagtagcagaatatgtctttactggaatatacacagtagaaatggttgttaagataatc
gccagaggttttattttacaaaagaaaacctacctacgagatccatggaactggctggac
ttctcagttatcgttttagcatatgtcacattcattttagagtttggaggagtaccagtc
ggaaatctctctggtattcggacattcagggttctgagagcttttaaaacaatatcggtc
ataccaggtttgaaaagtataatcaacgctctacttcgatcagccaagatgttgggtgaa
gtcttcttactgactgttttcgttctagccatcttcgccctggtctccttgcaattgtac
atgggcgtcttgagacagaagtgtgtcctgaatatcaatataactgcaattaatgaaacg
gaggagttttattataacttcatccagaatgaaacccattggaaatattggaatgacgag
ccccttgtttgcaataatatcaccggtgtgagtacatgcatgggtgacacgaactacacg
tgtcttccagacatcggaaaaaacccgaatggtcaatatggctacactagttttgataac
atcggctgggcaatgttgacttgtttccaaatattcactctcgacttctgggaaaacact
tataacttggttatcgcagctatgggtggttggagtgttgtcttcttcttcctagccgtg
atgttgggatccttctatttgatcaatcttatgctcgctgttgtcttccttgcatacaca
gaggagatggagaaccagggcaaggaaaaggagaagaaggcccagcaaatccgagaaaac
atctttaacatggatgcggaaaaactgaagaggttggccgagaagaaacggaggaggaaa
gagaggcgagatcagatgagaaagcttcagcttcagaatcttgagaaaatcgaaggagga
gggggcggggcggaggcaaatgataacgagggattcaatgcaaatgagaagatggataat
gacagtgataacacctccaaaatgtcacaggatgaaattaaagctgacactattgatgat
gataagaatgatgacgacaaatctgctgatgtgagcaaagacgattctaagagtcagaat
ggtagcgaagatggaagcaatgtcatcatgaataaccctgatgacaccgacgatggtagt
gacctgccagtgccatgttgtccatacaaaagctgttgtgtctgctgcttaacatgctgt
gtatgtccacgtggtatttaccgcaacctcaggaaagggcaatattactgcgccttgttc
gtcttagatccactgatggacttattcattacgctctgtatccttctaaatacagtcttc
cttatgttggatcaccacaacattaatgctgaaatggacaatgtgttggacattggcaac
aaggttttcacggtgatattcaccatcgagtgtggcctcaagctgattgctctagaagtg
aagttcttcaagggaggatggaacgtcttcgatctcgtcattgtcatattcagcttgatg
gatttgtttctctccagtattccgggtttatcagtgttgagaacttttagactgttgcga
atcttgaaacttgctcaatcctggaccacgatgcgtatgctgatcatgatcatcggtaat
accatcggtgcccttggtaatgtcagcttagtcctgcttattatcatctacgtctttgcc
gtcatggggatgcagttattcggtgcaaactacacagaggcgaacttcaacggggagata
ccaaggtggcattttcgggatatctatcactcgctgttgctgatatttcgtatcctgtgt
ggggaatggatcgagccgatgtacgagtgcatggattgttctgatgctgcggtgtgcatt
attatcttcatctcgtccttcattgtgggaaacatcatgattctgaatctcttcttggcg
ttattgatcaacgcattcgcttcggattcactgaagaagaaagatgaagaggaaaaccgc
attggtttggccatcgccaagctcaaacgctttgcaatatttatattctgttgttgttgc
aaggaattccgcagaccaagcaaaattggagtcgaggggtcgaaagatgatgctatgatc
gaggcaaagggcgagaacggtacagacaatacaaggaaagctagtgtcaccaaattcatg
gttgttgatgaagatgacaggatctcacagatcagtttggataatggagggcaacattac
aaaagtaacggtttggaactgacgcccgtccgtcacaggaactcgttggtatccattatc
catcagccaaacggttccttacatgatggatctatatacaatggttcgatacatagagta
tccgtgggtaatggaggcatgttgaatggactgatgcaaccatcttcacgtgctcattct
ccagtccctattggtaatgccctgatgccgaatggattgtacagtaacggaccgagcagg
aatggtagcgccagaagcattaagcggcccatgtcccacacaatctactcttcgatcgcc
aaccttcaagtggacaacatgcgagacaaccccagcatgccagccgtccggaacaccgac
tccgaaacaggcgagcaggagtcaagtaagatagttccggaccaagcagtggaagtccgg
atcaagagcgccgcaacccagcgtggagatgaagcactggtcgaagccggtatcattgaa
gatccggttcacgattgcttccctaagaagtgtgacttatggtgcattcgtaagtgcacc
tgtactttctgtacggatccggataattccagagcattcttctgttggaggaagttccga
gagacaatgtgtacgatcatcgagaaccgggtcttcgagggatttattctgttagctatt
tgtgcaagtagcatcacactgacatttgaagacatcaatctgccaggcaatttagtgctg
caagaaatcttggcaattagcaacatcgttttttgtgtaatctttgtgttcgaaatgctg
atgaaatggataggaatggggttcgtcaagtatttcaccagcttctggtgttggttggat
ttcattgttgtgattgttgctgtggtgagtctaattggggattccttaggtctctctggt
gtttctgcattcaaggtcctccgtacacttcgagcactgcgccctctacgagctatctcc
cgctggcagggcatgaagattgtggtgaatgctgtcgctcacgccattccagctatcttc
aacgtggtagtggtgtgtgtagtcttctggcttatctttagtatcatgggcgtgcaattc
ttcaaaggctctttctctaaatgcgttgacgagaatgacgagttgctgcccattacgatc
gtcaacaacttcacagattgtatcaatcttaactacacgtggaaggtagcaaaggtcaac
tttgacaacatctttagcggttacctcgccctctttcaagtggcaacatttgaaggctgg
ttggaggtgatccaagccagtgtagatagcagagggccagatatgcaaccttcctacgaa
gcatcaccaattgcttatatcttcttcgttgttttcatcatattcggtgctttcttcaca
cttaacctcttcatcggtgtcatcattgataacttcaacgagctaaaacgaaagtatgaa
ggtgacagttccttcggaatgtttcttactagcaatcagaagaattactatcagactatg
aggcgtcttggtgtccagaagcctacaaagcagatcaaacagccaacgaacaaaatccaa
gagtttttcttcaaactgaccagcagcaccaagtttgagatagttattgtctcgatcatc
tttgctaacatgatcgccatgacggtggagcactacaaacagtcgcaagagtttactaat
gtgctgaaggttttcaacattgtcttcactgtaatcttcacattcgagatgatactgaag
tggattggatatcgtcttcattacttcaggataccttggaatgtctttgacttcattgtg
gtcaccttttcattacttggaattctactcgatgatgtgttgtcatcatcattcatcaat
cctacaatcctccgagtcttccggctcatccggatcggtcggattcttcgtctcatcaag
tctgccaaggggatccggaaacttctgtttgccctcgccgtctcgatgcccgctctagtc
aacatcggagccctactcttcatgatcatctttatcttctccatcatcggaatggcgcag
tttgcctacgtgaaaaaacaaggcgccatagatgataccgttaattttgaaacctggctg
aacagcatgatgttgctgttccggtttgcgacttcagccggatggaacgacgtcctggat
ccgttgatgacagcccccccggaatgtgatccaacttacatggatctccccaatggcaac
tgtggtaactacatatttgccgccttgttttgtttcttatttctggtcatgactttcttg
gtgatagtcaacgtgtacgtggctgtgattctggagaatttcagtcaggcccacgctcag
gaagaagtgggaattaccgaagatgactttgggatgttttatcaagtgtggcagaaattt
gacccgaatgctacacagttcataatgtatgagcagctttccacattctgtgatacattg
gaacacccattgcgtctagagaagcctaacaatatcaaaatagccgggctagaattgcca
atctatgatgacataaaactgcattgtctggacgtgctctttgccctaactaaaagagtt
ctcggcgatgtcgaagaaagtgaggaatttaaagagttacaggcacaaatgtccatcaaa
tttaaggaatcatttcctgataggggagcaactgaacctactacaaccacccttcagatt
aaaaagaggggcacggctgccaagaagatacaaagagcgtttcggagatacagactcatg
gttgagatgcgcaaggcatccactgcctaccggaatcagcagagccttgaaggctccagg
cgaaactctatcaacccggacctggatagtagcatgaccagccagacatttgggcaaacc
cttactatacccagcggatatggcgttgataggagtgccacccctacgattccagagcag
tcgtataaatcagacaatgaggcgtatcgcgttgataatgatggtgatgacgtaccaaca
attgatgcgtcagaagagatcagaggcaatgaccgggatgtcatggtatag
DBGET
integrated database retrieval system
