Luidia clathrata (European starfish): 117295517
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Entry
117295517 CDS
T10152
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 87F-like
KO
K14411
RNA-binding protein Musashi
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117295517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117295517
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117295517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
117295517
NCBI-ProteinID:
XP_033634100
LinkDB
All DBs
Position
10:3784926..3797961
Genome browser
AA seq
533 aa
AA seq
DB search
MNIILNKSETDLRRLKMGEEPGKLFIGAVNSQVTKEEFQCFFEKFGEVSDIVLMEDSITK
KNRGFGFVTFADPAVATKIMQTGPHLLNGREIDPKPSVQRGQLPPSKPMPHKSLDKKVFV
GGIAQGTSEEGLRNFFNSQNLPVQDIVLMHDSQTLKSRGFGFVTFADDNTVDRVCRTRFF
NIDNKTVECKKAEPRGRNEMGGPGGGGPGGPGGPGGNFNPMHRGGQGGGPNNGGFNQGWN
PNPNQGFGNNQYNQGGGNFGQQGGWGGPPQQGQMGGNYGQQQQQGYGPRGGQMPNQGFRN
QYNNGNQGGYNQQQQPPPPQQQQQAGYNGGYGQPQQQQQQQQPPQQQQQPQQQQQGNYGV
PQTYGNYGNYQQPQQQQQAQPQQQPDQYNQQTPQQPTNQGYNAGNFNQPAQPNNFPQNGN
MGNYPQEASGYGPQRVNYSAPTQGNFTQPQAGGYGTDPSMNYGSQATAAAPQQQQQQQQH
PPPQQQQPPQQNYGQPAQGDHSQEMYGGTPQAAGNFAARGGNNAAVPFHPYRR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaatattattctaaataaatcagaaactgatttaagaagacttaagatgggtgaagaa
ccaggaaagctattcataggtgctgttaacagccaggtcactaaagaggaattccagtgt
ttctttgagaagtttggtgaagtgtcggacattgtgttgatggaggactcaattacaaag
aagaacaggggctttggtttcgtcacctttgcagacccagctgttgccacaaaaattatg
cagacaggacctcatttattgaatggaagagagattgaccccaaaccaagtgttcaaaga
ggacagcttcctccgagcaaaccgatgccacacaagagcctggacaagaaagtgtttgtc
ggaggaatcgctcaaggaacatccgaggagggactcaggaatttcttcaacagccaaaac
ttaccggttcaagatattgtgcttatgcatgacagccaaaccttgaagagtagaggtttt
ggatttgtgacgttcgccgatgacaacaccgtggacagagtctgccggacacgatttttc
aacattgataacaaaacggtggagtgcaagaaggctgagccaagaggcaggaatgagatg
ggaggcccaggaggaggtggccctgggggtccaggagggccagggggtaacttcaaccca
atgcataggggtggacaaggaggcggccccaataatggtggattcaaccagggctggaat
cctaatcctaaccagggctttgggaataatcagtacaaccaaggaggtggcaactttgga
cagcaaggagggtggggaggtcctcctcaacaaggacagatgggaggtaactatggtcag
caacagcagcagggttatggtccgaggggcggacaaatgcccaatcaaggcttcaggaac
cagtacaataatggtaatcaaggaggctataaccaacaacaacaaccaccaccaccacaa
caacaacaacaagcaggttataacggtggttatggtcaacctcaacaacaacaacaacaa
cagcaaccaccacaacaacaacaacaacctcagcaacagcaacaaggcaattatggcgtt
ccacagacctatggtaactatggtaactatcagcagccgcagcagcaacagcaagctcaa
ccccaacagcaacctgaccagtataatcaacaaacccctcaacaaccgaccaaccaggga
tataacgctggaaacttcaatcaaccggcacaaccaaacaacttcccacaaaatggtaac
atggggaactacccacaggaagcatcaggctacggacctcaacgagtcaattacagcgcc
ccaacccaagggaacttcactcaaccacaagctggaggatacggcactgaccctagtatg
aattacggcagtcaagcaacagcagcagcaccacaacaacaacaacaacaacaacaacat
ccgccaccacaacaacaacaaccaccgcagcagaactatggacaaccagcacaaggagac
cattcacaggagatgtatggtgggacacctcaggctgctggtaactttgctgcacgtggt
ggaaacaacgctgccgttccattccatccatacaggagataa
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