Luidia clathrata (European starfish): 117295927
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Entry
117295927 CDS
T10152
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
arun03015
mRNA surveillance pathway
arun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117295927
09122 Translation
03013 Nucleocytoplasmic transport
117295927
03015 mRNA surveillance pathway
117295927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117295927
03041 Spliceosome [BR:
arun03041
]
117295927
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
117295927
Spliceosome [BR:
arun03041
]
Common components
Common spliceosomal components
Cap binding complex
117295927
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
MurL_epimerase_C
LEKR1
Motif
Other DBs
NCBI-GeneID:
117295927
NCBI-ProteinID:
XP_033634615
LinkDB
All DBs
Position
10
Genome browser
AA seq
801 aa
AA seq
DB search
MSRRRRLEDDSDDSRSQKRRRTTTDQNEIEERLESLITRVGEKSTSSLESNLEGLAGVLQ
ADLPNYKNKIIGILCVCSTELPEKLSVYTTLVGLINAKNYECGGDFSEEMWRRLKELMKQ
NEWDRCRLLVRFIADLVNCRVVDVSSMVQLYEAFVAVTLEEGIPQVRSDWFVYTFLSSLP
WVGQEIAEKKEEELDKMLSVVETYMTKRKKDHIPMLRVWHSDTPHVQEDSIDCLWAQTCK
LRRDDWNHKSILRPYLSFDSILCEALQHTLPQFTVPPHNEECVYPLPKVIFRMFDYTDAP
EGPTMPGHHSIERYLVEEQLSCIISAYVKDRKECAAQLVSYHGKARVPLNYMIVEVMFGQ
LFNLPHPVKQEAAYASLLLELCKLQPSSLPQVLAQATELLYERLDNMNLNCIDRFVNWFS
HHLSNFQFRWSWDEWADCVSVDPEMPRPKFVREVLVKCMRLSYHQRIVESIPNACTEAFE
SLLPKPPVPIYKYNEEGAGSLPGTMIAHKLMDTIKARATTTEVLAVLDDVPNPTQAADSM
EDESTFNPLKIDIFVQTLLFLGQKSFSHSFSALAKFHPVFKTLADSEESQIYVLEMVREL
WVNHQQMIGVLIDKMLRTQIVSCPAVINWLFSGSMSKEFTKYYVWEIIHATLRKMSKHVG
KIETELQEARDKSNKKKRVDMESEEEEEEEDSDEDPGDIDAEIERLQESLETAQSEQKNL
FLIIFQRFIMILTEHIATSENRGVAFRTPWYNYCIQRLQQIFLMHYNQVRSYRSTLEGLL
FTGDTDPNILNVFQQFCSLSS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaagaagacgcctagaagatgacagtgatgatagcaggagtcagaagcgtcgg
aggaccactactgatcagaacgagatcgaggaaaggcttgaatccctcattacaagagtc
ggagaaaagagtacatcatccctagagagcaatttggaaggtttagccggtgtcctgcaa
gctgacctgccaaattacaagaataagatcatcggtattctgtgtgtgtgttcaactgag
ctgccagaaaagttgagtgtctacacaaccttggttggtctcatcaatgctaagaactat
gaatgtggaggcgatttttcggaggagatgtggaggcggttaaaggagctgatgaagcag
aacgagtgggacagatgtcgcctcttagtacgcttcatcgctgacctcgtcaactgccgc
gttgtggacgtctcctccatggtgcagctctacgaagcattcgtcgctgtgacgctagaa
gaaggcatccctcaggtcaggtcggactggtttgtgtacactttcctctccagtctgccg
tgggtagggcaagagattgcagagaagaaggaagaagaactggataagatgctgagcgtt
gttgagacctacatgacgaagagaaagaaggaccatattccgatgctgagggtttggcac
agtgatactccccatgtccaggaagatagtattgactgcctgtgggcccagacgtgcaaa
ctccgtcgtgatgactggaaccacaagagcatcctacgtccctacctgtccttcgatagc
atcctatgcgaggctctacagcacaccttgccgcagttcacagtcccaccccacaatgag
gagtgtgtctaccctttacccaaggtgatcttcaggatgtttgattacacagatgcaccc
gagggccccaccatgccaggacatcattccattgagagatacttagtcgaagagcaactg
agctgcatcatttctgcctacgtaaaggatcgcaaggagtgcgctgcccagttagtgagt
tatcacggcaaggcaagagttcctctaaactacatgatcgtagaggtgatgtttggtcag
ctcttcaacctgccccatcctgtcaagcaagaagcagcctacgccagtctcctgctggag
ctgtgtaaactccaaccaagctcactcccacaagttctagcacaagccacagagctcctg
tacgagagactggacaatatgaatctcaactgcatcgatcgcttcgtcaattggttctca
catcatctcagcaattttcaattccgctggagctgggatgaatgggccgactgtgtgagc
gtggatccagagatgcccagaccaaagtttgtccgtgaagtcttggtgaaatgcatgaga
ctgtcctaccatcagcgtattgtggagagcattccaaatgcatgcacggaggcgtttgaa
tcccttctccctaagccgcctgtacccatctataaatacaatgaggaaggagcaggatct
ttaccaggcaccatgattgcacacaaactgatggacaccatcaaggcgagagcaacaacc
actgaagtactcgctgtgctggatgatgtgccaaacccaacccaggcagctgatagtatg
gaagatgagtcaacgttcaatcccctcaagattgatatctttgttcagacacttctcttt
ctgggccagaaatccttcagccattccttcagtgcactcgcaaagtttcatcctgtgttc
aaaacccttgcggactcggaagagagccagatctacgttcttgagatggtacgagagctg
tgggtcaaccaccaacagatgattggtgtcctgatcgataagatgctgcggacccagatt
gtcagctgccctgcagtcattaactggcttttctctggctccatgagcaaggagttcacc
aagtattacgtctgggagataatccacgccaccttgaggaagatgagcaagcacgttggg
aagattgagaccgaactgcaggaggcaagggacaaatctaacaagaagaagcgtgtggac
atggagagtgaagaggaagaagaggaggaggacagtgacgaggaccctggtgacatcgac
gctgagattgagagattacaggagtcattggagactgcccagagtgagcagaagaacctg
ttcctcatcatattccagaggttcatcatgatcttgacggagcacatagcgacgagtgag
aatcgtggcgtggcattccgtaccccttggtataactactgtatccagagactgcagcaa
atattcctcatgcattacaaccaagtgaggtcttacaggagcaccctggagggtctactc
ttcactggagacacagacccaaacatcttaaacgtgtttcaacaattctgctctctcagt
tcatga
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