Luidia clathrata (European starfish): 117296141
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Entry
117296141 CDS
T10152
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117296141
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
117296141
NCBI-ProteinID:
XP_033634909
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Position
10:16796497..16817249
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AA seq
1047 aa
AA seq
DB search
MLKTDKVLQTKTRQGRVVRLVRELYLREDVPCNSELCLADCRKTGNSLVAADVTHYLVPD
CHVAGAFLEIMELPELTSIVFMQTVLHHVLHSKGQRVYKRLQNKVKDSRNHCIVFANEFC
RFAYSAREPGESEKHWLIRVVYNSSVWYYNHLAGQKPIVFLTEDIESGAKYGSETVGVHV
MNVKQYLEVFWPQLTQAHDMFDSLTASLTDTTDRKKGSNKDYQDYLPNDVLAAGIKSGLF
IEGSLRVNKYHAQDEAYVTRGSGSGIRLDSDILIPGMKNRNRAVHGDQVAIELLPKSEWT
GKISSLSTTGGPGDDTSDIARSNSKPTGRVVGVMQRHWRDYVACFPEEKQVQGSRSGRVL
VIPWDQRLPKIRISTQQADSLRDHRIIVRLDTWEADSQYPNGHFVRSLGPIGSLETEIAA
ILVENNISVGAFSEGQTKELPTNSDENPWRMTEEEMTGRRDLRRTHLIFSIDPKGCEDVD
DTLSIREMRDGKVLELGVHIADVSHFVQPNSLTDLEARQRSTTVYLADRRYDMLPEVLSA
DLCSLIGGVDRYAVSVMWQLDPLTYEVRKVWYGRTIIRSAHKMFYEAAQDLHDGKDVRCD
IPELAGMSEEDVQKRLSELRWGVDKLMDIARNLKARRVVGGAVQLEGIEVKVELSEEQEI
EDLVPKQTMEIHETIAECMIFANHWVAKKISETFPSFALLRHHPLPRQDQFQDLVDSAKA
RGFTIDTSSNKTLAESLDKCVDPKDPVYNKILRSLATKAMSNALYFSTGSLPRDQFFHYG
LALDRYTHFTSPIRRYADIIVHRLLMAAISDDGDDANSTQLLSNNALEELCVHINNKHRA
SQHAQQDSQGLFQTLFFKDRDPLSDESCTVDAVIQTLRANGFLVFIPRYGIKGAVTLKNK
EGQVFDVTEDRKTSWTSGSITRDDYSITVTSATSQSSFHLFDHVTVRISVQSSRAHSQRL
CLQLVSKEPHLSSQVVVEGHGLRTDIVQAVTKESEDKPQSACLITDSADVLGTSLHELKA
EYGQTDKEKSLYSILQQFAEIGLQEPG
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaactgataaagtgttacagacgaagacgcggcaggggcgtgtcgtgagactt
gtgagggagctttatctccgggaggatgtaccttgtaacagcgaactgtgcttagcggat
tgcagaaaaactggtaattccctcgtggcggccgatgtaacccactatcttgtccctgac
tgtcatgttgctggagcatttctagaaataatggaacttcctgagttaacaagcatcgtc
ttcatgcaaacagtgctgcatcatgtgttacatagcaaaggacaacgtgtgtacaagcgt
ttacaaaataaagtcaaggattccaggaatcactgcatcgtctttgccaacgagttttgc
cgttttgcgtatagcgcaagagaaccgggagagagtgagaaacactggcttatcagagtt
gtctacaacagcagtgtttggtattacaatcatctagctggtcagaagcccattgtgttt
ctaacggaagacattgagtctggtgccaaatatggaagtgaaactgttggtgtccatgtg
atgaacgtaaagcaatatctggaggtgttctggcctcaactgacccaagctcatgacatg
tttgactctcttactgcttcactgactgacaccacggacagaaaaaaaggcagcaacaaa
gactaccaggactatttgcctaatgatgtcttagcagccggtatcaagtcaggactgttt
atagaggggtctttaagagtcaataaataccacgcccaggatgaggcgtatgtgactaga
ggaagtggcagtggaatccgcttagattcagacattctcataccaggaatgaagaacagg
aatcgagccgtgcatggagatcaggtcgccattgaattgctccccaagtccgagtggacg
ggcaaaatcagttcattgtcaacaacaggtggccccggggatgacacatcagacattgct
aggagtaacagcaaacccaccggccgtgtagttggtgtcatgcagagacactggagggat
tatgtggcatgctttcctgaggagaagcaggtgcaaggatctcgttctgggagagttctt
gtcatcccttgggatcaacgccttcctaagatacgtatcagtacacaacaggcagactcc
ctcagagatcataggattattgtacgcctagacacctgggaagctgattcccagtacccc
aatggtcactttgtacgctcactcggaccaatcggaagccttgaaacagaaatagccgcc
attttagttgagaacaatatatcagtcggagctttctctgagggacagactaaagagttg
ccgaccaacagtgatgagaatccatggaggatgacagaggaggagatgacgggacgtaga
gatctccgccggactcatcttatcttcagtatcgatcctaaaggatgtgaagatgtggat
gatacattgtcaatacgcgaaatgagagacggaaaggttctggagcttggagttcatatc
gccgatgtgtctcattttgttcaacccaactcactgactgatctagaagccaggcagaga
tcgaccacagtgtatctggctgaccgacgttacgatatgctccctgaggtactgagcgct
gatctctgctctctgattggtggagtggatcgctatgcggtcagcgtgatgtggcaactt
gacccactgacctacgaagtccgcaaagtatggtatggacgaaccatcatcagatccgca
cacaagatgttttatgaggctgctcaagacttgcatgatgggaaagatgtgagatgcgac
ataccagagttggccggaatgagtgaagaagatgtgcagaaacgattatcagagctgcgt
tggggcgtggacaagctaatggatattgctagaaacctgaaggctcgcagggtcgttggg
ggcgctgttcaactagaaggaatagaggtcaaagtggaactgagcgaagagcaagaaatt
gaggatcttgtccccaagcagacaatggaaattcatgaaacaatagcagagtgtatgatc
tttgccaaccattgggtagcgaagaagatctcggaaacgttccccagctttgcactgttg
aggcaccatccccttccgaggcaagatcagtttcaagatttagtggacagcgctaaggcg
agaggattcacgatagacacaagctccaataagaccttagccgagtctctggataagtgc
gttgaccccaaggatcctgtctacaataagattctacgttcactggcgactaaagcaatg
tctaatgctttgtacttctccactggtagtctgcctagagatcagttctttcactatggt
ctggcactggatcgctacacgcatttcacgtcacctatcagacgatatgctgatattatt
gtgcatcgacttttgatggctgctatttctgacgatggtgatgatgccaacagtacgcag
ttgcttagcaacaatgcactagaggagttatgtgtacacataaacaacaaacatagggcc
tctcagcatgctcagcaggactcccaggggttattccaaacattattcttcaaggatcga
gaccctttgagcgatgagagctgtacggtggacgcagtcatccaaaccctcagggctaat
ggctttctggtcttcatccccaggtatggaataaaaggagcagtaacactgaagaacaaa
gagggccaggtttttgatgtcacagaagatagaaagacttcgtggacgtcaggctcaata
acgagagatgattattccatcactgtgacatccgcaaccagtcagtctagtttccatctg
tttgaccatgtaacagttcgtatctcagtacaatcatcaagagctcattcacagcgtctg
tgcctccagctagtgtccaaggaaccgcacctatctagccaagtagtggtagaaggacac
ggtctacgcacagacatagtacaggcggtaaccaaggagtctgaagataagccccagtca
gcatgcctcatcactgacagtgcagacgtgctgggtaccagtcttcatgagctcaaagca
gagtatggtcaaacagacaaggagaagagcttgtacagcatcctgcaacagtttgccgag
attggtcttcaggaaccaggatga
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