Luidia clathrata (European starfish): 117296347
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Entry
117296347 CDS
T10152
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117296347
Membrane trafficking [BR:
arun04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117296347
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117296347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
WD40
Lgl_C
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_TEP1_C
EIF3I
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
117296347
NCBI-ProteinID:
XP_033635112
LinkDB
All DBs
Position
11:complement(13192684..13239558)
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AA seq
1100 aa
AA seq
DB search
MFLVNEGALVSVCADDSLHLWNLRQKRPAILHSLKFNRERITNCTLPFQSKWLYIGTERG
NVHVVNIESFVLSGYVINWNKAIELSRKTHPGPVVHLSDNPIDANKLLIGFETGAVVLWD
LTTKMAEQRFNCSQPVRCVSWHHEGKQFIVSHTDGTLTMWNLKNAAKPANIISPHAKVPV
KGLKPEPCTPVLKVEWRSVKNGDPFILFSGGLPYDKANSTPSITIMQGKTTTVLEMEHTV
IDFLCLCDNPWPSNPQEPYAVVVLLESDLVVVDLTSQGYPCFENPYPMDLHESPVTCVQY
YADCPSDLIPHLYSAGANSLNRKKQLYSKKNWPVKGGGWGSGGSSEQEIVITGHADGTIK
FWDASRVMLQVLYKLKTAKVFEKKKQARSLDGDEEPFAIQMVKLCQESRLLAVAGASGHV
ILYRFSRLEVTTELSVLEIAIVYEPEEPDTPEAETPPPPPPTPLKRNTSTVSASSVASAM
SAPSLVTQTTSGGATAGSGPASGNQVTSTSSGDGIRDNVPNLKVKGGAHKRSSGFQADLC
CQLVWVDGEAPSTITAVEINSCYGLLAFGTVSGLVIVDYLQKTCLLNMGTPDLYGSADPY
TRTPRSPKKSKPQGLGDIVEQYMADPERCKSPTSSSGEQNGVCVSPTSSNNARKQGRNNH
DPAQLKRTANRSPPTPPPSPKEGPDGGRVDPTSTFHFGHLIKYVISSLSMNPSVLHVPYR
SEGSFTRSRSSSMSSLEKEAREGVQCLTFAESYTRKTESVTSPCVWVGTTLGSVLVIVIN
LPPPGEQRYTQPVIVTPSGTILRLKGSTLLMEFLDCNGSLITPPHEPWKDINRETKDVRE
KRPPLLQRSRMSPSSSTEIADRQFVIISSEKEAKVISLPSQTCAYRVKVAESSYVVRADV
ISLHNSVCLACYVANGHIMAFSLPSFRVLLDHDYLPLTDLRIGRTFQFSSHGKGVYQASP
TELQRITICSEASENLHDMLGDLFLPVNTPEAPTKGFFRGLFGGGGSQLDRENLFGESSG
RPSRSIARHIPGTGGLEGVKANSSSAAGELYKARIALHERGEKLSELEERTAQMMANAEN
FSTGSHQLMQKYKDKKWYQF
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttgttaatgagggtgctttagtcagtgtgtgcgctgatgacagtttgcactta
tggaacctcagacagaaaagaccagcaatacttcattcactgaaattcaacagagaaaga
ataacaaactgcacccttccattccaaagcaagtggttgtatataggcacagagagaggc
aacgttcatgtggttaacatcgagtcattcgtactctctggctatgtcatcaactggaat
aaagcaattgaattgtcgcggaagacacatcctgggcctgttgttcacctgagtgataac
cccatagatgctaataagctactgattggattcgagactggtgcagtggtcctgtgggac
ctgacaaccaagatggcggagcaacggtttaactgtagccaaccggtgcgctgcgtctcc
tggcaccacgaaggaaagcagttcattgtcagtcatactgatggcaccctcacgatgtgg
aacctcaaaaatgctgccaaacctgcaaatatcatctccccacatgctaaagtgcccgtc
aaagggctgaaacctgagccgtgtacaccggtactcaaagtagaatggaggtcagtgaaa
aacggggacccattcattctgttttcagggggattaccgtacgataaagctaatagtaca
ccaagtataaccatcatgcagggcaagacaaccaccgtgctagaaatggaacataccgtc
atagactttctttgtctgtgtgacaacccctggccaagcaatccccaggagccatatgca
gtggtggtgttactggagagtgatctagtggtagtagatctaacgtcacaaggttatcca
tgctttgagaatccctacccaatggatctacatgagtctccagttacatgtgtgcagtac
tacgccgactgcccatccgatcttataccacatctgtattcagctggagctaatagcctc
aatcgcaagaaacaactctatagtaaaaagaactggccagtgaaaggcggaggatgggga
agtgggggaagcagtgagcaggaaattgttatcactggacatgcagatggtacaatcaaa
ttctgggatgcatcgcgagttatgttacaagtactgtacaagctgaagactgccaaagta
tttgagaagaagaagcaagctcgtagtttagatggtgatgaggagccctttgctattcag
atggttaaactttgtcaggaaagcaggttactagcggtggcaggagcaagtggtcatgtt
attttgtataggttcagtagattggaagtcactacagagttatcggttctggagattgct
attgtgtatgaacccgaggaaccggacaccccagaggctgagactccgccccctcctcca
cccaccccacttaagcgcaacaccagtacagtcagcgcgagctctgtagctagtgcaatg
agtgcaccttctctagtcacacagacaacgtctggtggggctacagcaggcagtggacca
gctagtggtaaccaggtgacgagtaccagctcaggagacggaataagagataacgttcca
aatttaaaggtgaaaggtggagcgcataaacggtcttcaggatttcaggctgatttgtgc
tgtcagctggtatgggttgatggtgaagctccatctactataactgctgtggaaatcaac
tcatgttatggactccttgcctttggtactgtgtctggccttgtcattgtggattacctt
cagaagacatgtctacttaacatgggaaccccagatctgtacggctcggcagatccctac
acaagaaccccacggtcgcccaagaagagtaaaccgcagggtttgggcgatattgtggaa
cagtacatggctgatccagagagatgtaaatcaccaacaagtagctctggtgaacagaac
ggtgtttgtgtgagtcccactagtagcaacaatgctcgtaaacagggccgcaataaccac
gacccagcccagctcaaacgcactgcaaacagatctccgccaacccctcctcccagtcca
aaggaggggcctgacgggggtagagtggatcccactagcaccttccacttcgggcatctg
atcaaatatgtcatatctagccttagcatgaacccatccgttctccacgtgccgtatcgc
agcgaaggttcttttacccgttcaaggagctctagtatgtccagccttgagaaggaggca
agagaaggagtacagtgcttgacatttgccgagtcttacacaagaaaaactgagtctgtg
acgtcaccgtgtgtttgggttgggactactctgggctcggtcctcgtgattgttattaac
ttgcctccgcccggagagcagcgctatactcaacctgttatcgtcacacccagtggaacc
atattacgtctaaagggaagcacattactgatggaattcttggattgtaatggtagcttg
attactccgccacatgaaccatggaaagatatcaacagagaaacaaaagatgtccgggaa
aagaggccaccattgttacagcgaagtcgaatgtctccttcctcatccactgaaattgca
gatcggcagtttgttatcatcagctctgagaaagaagcaaaggtaatatcgctaccatct
caaacatgtgcttatagagtcaaggtagcagagtcctcatatgtagtaagagcagacgtc
atcagcttacataatagcgtttgtctggcatgctatgttgccaatggccacatcatggcg
ttcagtctgcccagttttagagttctgctggaccacgactaccttccacttaccgacctc
aggatcggacggacattccaatttagctctcatggtaaaggagtctaccaagctagtccc
acagagctacaaaggataacaatatgcagtgaagcaagtgagaatcttcatgatatgtta
ggggacttgttccttccagtcaacactccagaggctccgaccaaaggcttcttcagaggc
ttgtttggtggtggaggcagccagttagacagagaaaacctatttggggagtcaagtggt
cgtccatcacgtagtatcgccagacacatccccggtactggaggtttagaaggtgtcaaa
gctaattccagctcagcggctggggaactctataaagcacgcattgccctccatgagaga
ggtgagaagctgagtgagctcgaggaacgcactgctcagatgatggccaacgcagagaac
ttctccactgggtctcatcaacttatgcagaagtacaaagacaaaaagtggtatcagttc
tga
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