Luidia clathrata (European starfish): 117296433
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Entry
117296433 CDS
T10152
Name
(RefSeq) WD repeat-containing protein 3-like
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117296433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arun03009
]
117296433
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117296433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Utp12
NBCH_WD40
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_NOL10_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_SCAP
PEP5_VPS11_N
ASA1
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_WDR19_1st
CFAP251_N
WDR54
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_EIPR1
PAC11
RMC1_N
VPS11_N
TRM82_WD
Beta-prop_RIG_1st
Beta-prop_WDR19_2nd
PROPPIN
Utp21
Motif
Other DBs
NCBI-GeneID:
117296433
NCBI-ProteinID:
XP_033635246
LinkDB
All DBs
Position
11:9301059..9320079
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AA seq
943 aa
AA seq
DB search
MGLTKQYLRYASSATFGIVGTQKANVLFVELRGIKGKYVAAAACEHVFIWDLRKSEKMMV
LHGDKSSEVSILAKSPQAQTLAVGYADGTVKLFSLATGEMTVTFSGHKSAVTALGFDKDG
LRLASGSKDTDVIVWDVVNESGLYRLKGHKGVVTQCHFMQKHNILITSSKDTFVKFWDID
TQHCFKTLIGHRTEVWDFVIIGDDHRLVTGAGDSELRVWDIAFQDETEDGAEVPAKKPRL
STIIGDDEEEDIEDDDDTSILTCHCVGSIMRKGSQRVVSLSTDCTGRVLSCHGADRRLEV
FLVLTEDERTKLLNKKQRKARKKIREKETQGEEEEKILESLAVKDEIQTCCILEASSKIR
SFATLLENDGASVKMVLQLYNNSLETHVIQSLEGKRWAGEKQGAVTLPGHRSDVRTVTFS
ADNTTVLTGSGESIKVWNRATQQCIRSMKSGYALCSAFVTGERHCLIGTKTGHLELFDIA
AGVMLENVEAHEGALWAIAVAPDKRGFVTGSADKTLKFWDFELIPDPDSKESGKRLTVVH
KRTLQMSDDVLCVKYSPDQRLLAVALLDSTVKVFFADTLKFFLALYGHKLPVLTMDISSD
STLIVTGSADRNIKIWGLDFGDCHRSMFAHDDSIMSLQFVPKTHLFFSAGKDKKIKQWDA
DHFELITTLEGHHAEVWCLAVSSNGNFLVSGSHDKSLRLWERTQEPLVLEEEREMEREKA
AEDAIAHEEQQVLPGQVASNEVGTAGRKTVETVKAAERIMEALELYKEETAKEKEHRETQ
QAHKKGLIPPMKMHPILQAFGNISPTRYVLDVIRKVKSSELEEALLVIPFSYVLDLLPLL
ETFINSGWQVELSCRCLLFLLRVHHGQITSSQVLLPIIDKVRSSSMRQVHHLRDQIGFNL
AGLQFLHREVESRSDVQLFGDASIKMKEKKKKKRKLMLTMATS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggggttaacaaagcaatacttgcgctatgcatccagcgctacctttggcatagtaggc
actcagaaagctaatgttttatttgtcgagctccgtggcatcaaggggaagtatgttgct
gctgcagcttgtgagcatgtcttcatttgggatctacgtaaatctgaaaagatgatggtt
ctccatggagacaagtcctcagaagtgtcaatcctggccaagagtcctcaagcccagacc
ttggctgtcggctacgctgacggaacggtcaagctcttcagccttgccaccggtgaaatg
accgtcaccttcagcggccacaaatcggccgtaacggctctaggttttgataaggatgga
ttgagactagcatctggttccaaagacacggatgtcattgtgtgggatgtggtgaatgag
agtggtctgtatcgactcaaaggccacaaaggtgtcgtcactcagtgtcacttcatgcag
aaacacaacatcctcattacaagctctaaggacacatttgtcaaattctgggatatcgac
actcagcactgcttcaagaccctcattggacacaggacagaagtgtgggattttgtgata
attggagatgaccatcgactggtgacaggtgcaggagacagtgagctgagagtctgggac
atcgcatttcaagatgagactgaagatggggctgaggtaccggccaagaagcctagactg
tcgaccattattggtgatgatgaggaggaagacatcgaagacgatgatgacacaagtata
ctgacttgccattgtgtaggatccatcatgcgtaaagggagtcaacgtgtggtgtctctc
tccactgactgcacaggaagggtgctatcttgtcacggggcagatcgtaggttagaggtt
ttccttgtacttactgaggatgagcgtacaaagctgctcaacaaaaagcaaaggaaagct
agaaagaaaatcagggagaaagaaactcaaggtgaagaagaagagaagattcttgaatct
ttggctgtcaaagatgaaatccaaacttgctgcatcttggaggcttctagtaaaataagg
tcatttgctaccctcttggagaacgacggtgcatcagtgaagatggtactgcagctgtac
aataactccctagagacccatgtcattcagtcattggagggaaagcgctgggcgggggag
aagcaaggtgccgtcaccctaccgggtcataggtcagatgtcaggacagtgaccttcagt
gcggacaacaccactgtgctgactggctccggagagtccatcaaagtttggaacagggcc
acccagcagtgtattcgctccatgaagtctggttatgctttgtgctctgcgtttgtgacc
ggggaacgacactgcctgatcggcaccaagacgggccatctggaactttttgatatcgca
gctggggtcatgcttgagaatgttgaagcacacgagggcgctctttgggccattgctgta
gctcctgataagagaggtttcgtgaccggcagcgccgataaaaccctgaaattctgggat
tttgagctcattcccgaccctgactccaaagagtctggaaaacgtcttactgtggtgcac
aagcgtactctgcagatgtctgatgacgtcctatgtgtgaaatactcacctgatcagagg
cttcttgctgtagcactgctggattcaacagtcaaagtcttctttgctgatactcttaag
tttttcctggccttgtatggacacaagctgcctgttctaaccatggacatctcatcagac
agtactctcattgtgaccggatcggcggatcgtaacatcaagatctggggtcttgacttt
ggtgactgtcaccggtcgatgtttgcccacgatgacagcatcatgagccttcagtttgtc
cctaagacgcatctcttcttcagcgctggtaaagacaagaagatcaagcagtgggatgca
gatcactttgagctgatcacaacgttagagggccatcatgctgaagtttggtgccttgca
gtaagctcaaacggcaattttctggtgtccgggtctcatgataagtcactgcgtctctgg
gagaggactcaagaacctcttgttcttgaggaggagagggagatggagagagaaaaggct
gctgaggatgccattgctcatgaagagcaacaagtgcttccaggtcaggtggcatccaat
gaggtaggcacagccgggaggaagacggttgaaacagttaaagcagcagagagaatcatg
gaagctcttgagctgtacaaggaggagacggccaaggaaaaagagcatagagagactcaa
caggctcataagaaaggattgatcccacccatgaagatgcatccaattcttcaggcgttc
ggaaacatatcgcccacaagatatgtcctcgatgtcatcaggaaagtcaaatcaagtgag
ttagaggaggcgttattggtcatccccttcagctatgtactggaccttctacctcttcta
gagaccttcattaactcagggtggcaggtggagctgtcttgcaggtgtctactcttccta
ctcagggtgcatcatggtcagatcacatctagtcaagtattgttaccaatcattgataaa
gtacgcagcagttccatgagacaagtacaccatctcagggaccaaataggtttcaatctt
gctggtctgcaattcctccatcgtgaagtggagtcgagaagtgacgtccagctttttgga
gatgccagtatcaagatgaaagagaaaaagaagaagaaacggaagctcatgctcaccatg
gcaaccagctaa
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