Luidia clathrata (European starfish): 117296748
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Entry
117296748 CDS
T10152
Name
(RefSeq) syntaxin-5-like
KO
K08490
syntaxin 5
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117296748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117296748
Membrane trafficking [BR:
arun04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
117296748
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
ABC-2_memb_rel
Skunalike_TailTerm
Syntaxin-18_N
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
117296748
NCBI-ProteinID:
XP_033635685
LinkDB
All DBs
Position
1:21764488..21779639
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AA seq
350 aa
AA seq
DB search
MSTRRRHTPETGWDQQPYLSQNNWTVTTHNVEKEKSQASVPFEQEMTCRDRTQEFSSAIK
SIQSRQGNGVAQGRRPASRTHQHTEFMLIAKQIGKDITNTFTKLEKLTILAKRKSLFDDK
SIEIQELTYIIKQDINSLNKQIGQLQQVVRQRNSQNGRHMQTHSNTVVLALQSKLANMSN
DFKTVLEVRTQNLKDQKDRREQFSQGPIASSLPPSAMSASGGSVLLQEEQKNDFAIDMSS
MDGPRHRTQQMAMVEEQDNYVKNREETMHSIESTIVELSSIFQQLAHMVKEQEEQVQRID
NNIEDTTLNVEAAHGEILKYFQSVTSNRWLMVKVFIVLIVFFVIFVVFLA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcggcgtagacacacaccagagactggttgggatcagcagccgtatctttca
cagaataattggacagtaaccacccacaacgttgagaaggagaaaagtcaggcctcagtg
ccgtttgagcaagagatgacgtgccgagatagaacacaggagttcagctcggctatcaag
tcaatacagtcaagacaaggcaatggagttgcacagggtagaagaccggcttccaggaca
catcagcatacagagttcatgttaatagctaagcaaattgggaaagacatcacaaacaca
tttacaaagctagagaaattaacaatattggccaagaggaaatctctatttgacgataaa
tcgatcgaaatccaggaattgacgtatataattaaacaagatatcaacagccttaacaaa
cagattggtcagctacaacaggttgtccggcagagaaattcccaaaatggacgccatatg
caaacacattccaatacagtggtattggccctgcaatccaaactggccaacatgtccaat
gacttcaagacagtactggaagtccgaacacagaatttgaaagatcagaaggacaggaga
gagcagttctcacaaggtccaatcgcctcaagtctgccaccatctgccatgagtgcctcc
gggggttctgtccttcttcaagaggagcagaagaatgactttgccatcgacatgagctct
atggacggcccacgacaccgcacccagcagatggccatggtggaagaacaagacaactat
gtgaagaatagagaagagacgatgcacagcattgagagtacgatagtggagctcagtagt
atattccagcagctggcacatatggtgaaggaacaagaagaacaagtccaaaggatcgac
aacaacatagaggacacgaccttgaacgtggaggcagctcatggggagattctcaagtat
ttccagtcggtcacctcaaacagatggctcatggtcaaggtgttcattgtactcatagtc
ttctttgttatattcgtcgtcttcttggcctga
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