KEGG   Luidia clathrata (European starfish): 117297038
Entry
117297038         CDS       T10152                                 
Name
(RefSeq) DNA mismatch repair protein Msh2-like
  KO
K08735  DNA mismatch repair protein MSH2
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:arun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    117297038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arun03400]
    117297038
DNA repair and recombination proteins [BR:arun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     117297038
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II AAA_27 ATPase_2
Other DBs
NCBI-GeneID: 117297038
NCBI-ProteinID: XP_033636052
LinkDB
Position
11:12194668..12215595
AA seq 931 aa
MALKSNDAFADNAPEDGFLKCLRSMPVKPATTFRVFDRTEYYTVHGEDAMFAAKECFKTL
GVVKYTGSGEKKVPYVNLSKMNFESMVRDLLLIRQYRVEMYKNMATGKGNDWQVAYKASP
GNLTQFEEILFGNNDMSTSASVIAVKYVSEGSGGQLTVGVGYADATLRELAVCQFTDSEH
FSNLEALLVQLGPKECLIQSQSGEGAVDSAKLKGVLERSGLLVTERARADFGTKDVEQDL
NRLLKGASEEQRNAATLGEMEKTTAVGSLAALIKYLELLGDESNFRQFRLKSFDLTQYMR
LDSSAVRALSLLPSPQDGGNKNACLLGLLNKCKTPQGQRLLAQWIKQPLVDKNKIEERLD
IVEAFVNDVELRQTLQEEQLKRIPDLQRLAKRIQRKKATLEDCYRIFQVVEFMPVLLETL
ERPGIDLLKEVFSNPIMELLLDFAKYQEMVETTIDLDQVKNHEFLIKPNFDEELTNLREK
MDGLENNIQAQLGKAARDLGLEANKTIKLESNNQLGYFFRVTRKEEKVLRNNKKYATIDT
NKNGVRFTQSTLRSLNEEHMSVKEEYNEMQKAIVAEIIGIAAGYVDRMMLLSDIIAQLDV
LVSFAHVSSNAPISYVRPTLSEKGQGGIKLVEARHPCLEVQDDVAFIPNGVTFEREKQMF
YIITGPNMGGKSTFIRQIGVVVLMAQLGCFVPCRSAEISIVDSILARVGAGDSQLKGVST
FMSEMLETASILRSASENSLIIIDELGRGTSTYDGFGLAWAISEHIATKISGFCLFATHF
HELTALADEVQTVNNLHVTALTTDGQLTLLYRVKPGVCDQSFGIHVAELVHFPKKVIDYA
KMKALELEDYQSTGAPGGGSMEGLDAPAAKKRRLEKQEGEMIIDDFLKKVKQLDTETMSD
EHVYEAVQRLKEEVAKKSSPYVQEVLSRSDI
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggcactcaagtccaatgatgcctttgcagacaacgctcctgaggatggatttttaaag
tgtctgagatcaatgcccgtgaaaccggcaacaaccttccgagtttttgaccgtacagaa
tattacactgtccatggtgaagatgcaatgtttgcagcaaaagaatgtttcaagacactc
ggtgtagtcaagtacacaggatcaggagagaaaaaggtgccatatgtcaacctgagtaag
atgaactttgagagcatggtgcgagatcttctactcatacgacagtatcgtgtcgagatg
tataagaacatggcaacggggaaaggcaacgactggcaggtggcttacaaggcttctcct
ggtaacctcacccaatttgaagagatcctcttcggtaacaacgacatgtcaacgtcagcc
agtgtgattgctgttaagtacgttagcgagggctcaggggggcagctgactgtcggagtt
ggctatgctgacgctactctgagggaactagccgtgtgtcagtttactgatagtgagcat
ttctccaacttggaggccctactggtgcagctgggtccaaaagagtgcctgatacaatcg
caatcaggcgagggcgctgtggactcggccaaacttaaaggcgtgttagaacgcagtgga
ctcctggtcaccgagcgagcgagggcggactttggcaccaaggacgttgagcaggatctg
aaccgtcttctgaagggagccagcgaggagcaacggaatgctgccaccctgggggagatg
gagaagacaactgccgtgggatcgctggctgcgttgatcaaatatcttgagttacttgga
gatgagagtaacttcagacagtttcgtcttaaatcgtttgatctgacgcagtacatgaga
ctggattcctctgcagtgagagcgctgagtctcctgccatcaccacaggacggcggtaat
aagaatgcatgtcttcttggactccttaataaatgcaaaacccctcaaggtcaaaggtta
cttgcccagtggatcaaacagccgttggtggacaaaaacaaaattgaggagcgtcttgac
atcgttgaggctttcgtgaacgacgtcgaactccgccagactttacaggaggagcagctg
aaacgaatccccgacctccagcgtctcgccaagaggatccagcgcaagaaggccacattg
gaggactgctatcgcatctttcaggtcgttgagttcatgcctgtcttacttgagactcta
gagaggccaggcattgatttattgaaggaggttttcagtaatcccatcatggaattgttg
ctggattttgccaagtaccaagagatggtggagacgaccattgatttagaccaagtgaag
aatcacgagtttctcatcaaaccaaattttgatgaagaactaacgaacttacgggagaag
atggatggtctagaaaataacatccaggctcagctaggcaaggcagcgagggatctcggc
ctggaggccaacaagaccatcaaactagagtccaataaccagctgggatatttcttccgt
gtcacgaggaaggaagaaaaagttttacgaaacaacaagaagtatgccaccatcgacacc
aacaaaaacggagtccgtttcacgcagtccacgttgcgtagtctgaacgaagaacacatg
tcggtcaaggaagagtataatgaaatgcagaaagccatcgttgccgagatcattggtatt
gcagctggttatgttgaccgcatgatgctgttgagtgatatcattgcacagttggacgta
ctagtgagctttgcacatgtgtcctccaatgcccctatctcctacgtccgccctacactg
tcagagaagggacagggtgggatcaagctggtcgaggcaagacacccatgtctggaagta
caggacgatgtcgccttcattccaaacggcgtgacttttgagagggaaaaacaaatgttt
tatatcatcactggaccgaatatgggcggaaaatccactttcataagacagatcggtgtt
gttgtcctgatggctcagcttggatgcttcgtcccgtgtcgatcggccgagatctccatc
gtagattccattctagctagagtaggagcaggagacagtcaacttaaaggcgtctccaca
ttcatgtctgagatgctggagaccgcatccattctccggtctgcatcggaaaactctctt
atcataattgacgagctgggaagagggacgtcgacgtatgatggcttcggactcgcttgg
gcaatctcagagcacatagcaaccaagatatcaggattctgtttatttgctacccatttt
cacgagctgactgcactagccgatgaggtccaaaccgttaacaatctacatgtgacggcg
ctcaccaccgatgggcagctcacacttctctacagagtcaaacctggtgtttgtgaccag
agttttgggatccacgtcgctgagttggtccacttccccaagaaggtgatagactacgct
aagatgaaagcattagagctagaggactaccaaagcactggagccccgggaggagggagc
atggaggggctagatgcaccggctgccaagaagaggagactggaaaaacaggaaggagaa
atgatcattgacgatttcttgaagaaagtgaaacaactcgacacagaaacgatgtctgat
gagcatgtttatgaggcagtgcagcgattaaaagaagaagttgcaaagaagagtagtccg
tatgtacaggaagtgctgtccaggagtgacatttga

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