Luidia clathrata (European starfish): 117297408
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Entry
117297408 CDS
T10152
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04137
Mitophagy - animal
arun04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117297408
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117297408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117297408
03009 Ribosome biogenesis [BR:
arun03009
]
117297408
04131 Membrane trafficking [BR:
arun04131
]
117297408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arun04147
]
117297408
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117297408
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117297408
Membrane trafficking [BR:
arun04131
]
SNARE
SNARE associated proteins
Others
117297408
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117297408
Exosome [BR:
arun04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117297408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
CDC48_2
AAA_5
AAA_2
TIP49
AAA_22
AAA_14
nSTAND3
RNA_helicase
NPHP3_N
AAA_17
ATPase_2
Vps4_C
Mg_chelatase
AAA_28
IstB_IS21
AAA_18
Parvo_NS1
ABC_tran
AAA_7
ATPase
NB-ARC
AAA_24
NACHT
DUF815
TsaE
ResIII
Viral_helicase1
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
117297408
NCBI-ProteinID:
XP_033636320
LinkDB
All DBs
Position
12:complement(6641175..6669790)
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AA seq
808 aa
AA seq
DB search
MADGGNDDVATAILRTKSKPNRLIVEDANNEDNSVVSLSQAKMDELQLFRGDTVLLKGKK
RRDTVCIVLSDDKLTDEKIRINRVVRNNLRVRLGDIVSVQACPDVKYGKRIHVLPLDDTV
EGLTGNLFEVYLKPYFTEAYRPVRKGDIFLVRGGLRGVEFKVVETDPGPYCIVAPDTMVH
CAGEPIKREEEEEILNEVGYDDIGGVRKQLAQIKEMVELPLRHPGLFKAIGVKPPRGILL
YGPPGVGKTLIARAVANETGAFFFLINGPEIMSKLAGDSESNLRKAFEEAEKNAPAIIFI
DELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDSALRRFGRF
DREIDIGIPDATGRLEILRIHTKNMKLAEDVDLEQIANETHGHVGSDLAALCSEAALQQI
RNKMDLIDLEEETIDAEVMDSLAVNMNDFRFALGKSSPSALRETVVEVPTVNWTDIGGLE
SVKRELQELVQYPVEHPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFISIK
GPELLTMWFGESEANVRDVFDKARQAAPCVLFFDELDSIAKSRGGNTGDAGGASDRVINQ
VLTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDELSRVSILKANLRK
SPVSKDVDLIYLAKVTHGFSGADLTEICQRACKLAIRQSIEIDIRKQRELAENPDLDMET
DEDDAVPEITKAHFVEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGGSFSFPEEQGPSG
GQAPGPGSGSGNDPRLYADDNGDDDLYS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaggaaatgatgatgttgctacagccattctgcgcacaaagtccaagcca
aaccgactcattgttgaagatgcaaacaatgaagataactcggttgtttctttatcacag
gctaagatggacgaacttcagctcttccggggtgatacagttcttctgaagggcaagaag
agaagagacacagtctgtattgtgctctctgatgacaaactaacagatgaaaagatacgc
atcaatcgtgtagttagaaataacttacgtgtgcgtcttggagatattgtcagtgtacaa
gcctgcccagatgtgaagtacggcaaacgaatccatgtcttgcctctggatgacactgtg
gaaggactcactggaaacctgtttgaggtgtacctcaagccttacttcactgaggcatat
cgacctgtacgcaagggggacatcttccttgttcgtggaggtttacgaggtgtagagttc
aaagtagttgagacagaccctggaccatactgcattgttgctccagacactatggttcat
tgtgcaggtgaaccaatcaaaagagaggaggaggaagaaatcttgaatgaggttggctat
gatgacattggtggtgtacgtaaacagcttgcacagatcaaagagatggtggaattacca
ctacgtcatccagggctcttcaaggctattggtgtcaagccaccaagaggaattcttctt
tatggaccacctggagtaggaaagactttgattgctcgtgcagtagccaatgaaacagga
gcattcttcttcctcattaacggaccggagatcatgagtaagctcgctggagactccgaa
tccaatctgcgtaaagcgtttgaggaagcagaaaagaatgcaccggccattatcttcatt
gatgagttggactctatagctcctaagagagagaagacacatggtgaagttgagaggcgt
attgtgtctcaattgcttaccctcatggatggattgaagcaacgtgcacacgttatcgtc
atggcagccactaacagaccaaacagcattgattccgccctcagaagattcggtcgcttt
gatcgtgagattgatattggtattcctgatgctacgggacgtcttgagattcttcgcatt
cacacaaagaacatgaaactagctgaagatgtggacttggaacagattgctaatgagact
catggacatgttggctctgacctggctgccttgtgctcagaagctgcactgcaacagatt
cgtaacaagatggatttgattgaccttgaagaagagacaatagatgcagaggtcatggat
tctctagctgttaatatgaatgacttcagatttgcccttggtaagagtagtccaagtgca
ttgcgtgagactgtggtggaggtaccaacagtaaactggaccgacatcggtggtctggag
agtgtgaagagggagttgcaggagttagtacagtaccctgtggaacatccagataaattc
ctcaagtttggaatgacaccaagccgtggagtactcttctacggacctccaggatgcggt
aaaactctcttagccaaggctattgcaaatgaatgccaggccaacttcatctcaatcaaa
ggaccagagcttctcactatgtggtttggagaatcagaagcaaatgtcagagatgttttt
gacaaggccaggcaagctgccccatgtgtgttgttttttgatgagttggattccatagcc
aaatcccgtggtggtaataccggtgatgctggtggtgcctctgaccgtgttatcaatcaa
gtcttgacagaaatggatggtatgggagctaagaagaatgtcttcatcattggtgcaacc
aacaggccggacattatagacccagccatattacgtccgggtcgattggatcaactgatc
tatattcctcttcctgatgagctgtctcgcgtttcaatccttaaagctaacctcaggaag
tcacctgtatccaaggatgttgatttgatttatttggctaaagtaacccatggcttcagc
ggtgctgatctgactgagatatgtcagcgtgcctgtaaactagctatccgtcaaagtatt
gagattgacatccgtaaacagagagagcttgccgaaaaccctgacctggacatggagacg
gacgaagatgatgcagttccagagattaccaaagcacactttgtggaagctatgaggttt
gccaggcgatccgtcagtgacaatgacattcgcaaatatgaaatgtttgcacagacattg
cagcagagtagagggtttggtggtagcttcagctttcctgaggaacagggaccaagtgga
ggtcaagctccaggaccaggctctggatcgggaaatgacccaagactatatgctgatgac
aatggagatgatgatttatacagttaa
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