Luidia clathrata (European starfish): 117298083
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Entry
117298083 CDS
T10152
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117298083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arun03021
]
117298083
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117298083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
117298083
NCBI-ProteinID:
XP_033637211
LinkDB
All DBs
Position
12:14449832..14462564
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AA seq
538 aa
AA seq
DB search
MSLKAGFSKGPSRPSSSTMGPAEPAKCIVKLQTKQSRKYSIMQFNRGDNVDLSKWKQAKM
ERENNMREFKMLNPDMPTHGAGSEFGREVREEARRKKYGVVAKKYKEENQPWILKQLGNP
GKKFKGKKEGLISENSNYYIFKKQADGTFEASPVDSWYSFTSVAKHKTLTAEEAEEEFGR
RDRTFNFFTLMVEKRMKESAGEELSKEDEEELKAKTKTRKKKVDLRITEDDDYQDLMTSE
ESDAYNSDDDEPAAKSKSKKKGAKKRKSKKKKQDSDDEGEEESDEGDFEGKELDYISEDS
SDEEEEQKKIDIMGLDEELHKIEEEEEEEEEEDKEKEEEKKDEMNRGKTEEKVKKEGESS
SSSSDSDDSDIDDNKIHSAMLMQQKKPSKRPATPPSQKTPSKTSSRSASRPETPTQNANT
NSTATSSTLSDAANKLQDRVSLKRPGTDEAHSSKRHKTEESASASRIAGKETVGLTEDVI
RRYLMRKPMTTKDLLYKLKSKKIGLKSDVLVKQFTEIIRKLNPQQTKIKGKTYWFIKQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttaaagcgggctttagtaaaggaccttcaaggccgtcatcgtctacaatggga
ccagccgaaccagcaaagtgtattgtcaaactacaaacgaagcagtcacggaaatacagc
ataatgcagtttaacagaggagataatgtggatttgtccaaatggaaacaggccaagatg
gaacgcgagaacaacatgagggaattcaagatgctaaatccagatatgccgacccatgga
gccggcagcgagttcggacgtgaggtgagggaagaggcaaggcggaagaagtacggcgtt
gtggccaagaaatacaaagaagaaaaccaaccatggatccttaaacaactgggcaatcca
ggcaagaagttcaagggtaaaaaggaaggtttgatcagtgagaactccaactactacatc
tttaaaaagcaagccgacggcacctttgaagcctcgccggttgattcttggtacagtttc
acgtccgttgctaaacacaagacgctgacagctgaggaggcggaggaggaattcggaagg
agagatcgcacctttaatttcttcaccctgatggtagagaagagaatgaaggaaagcgcc
ggggaggaactgagcaaggaggatgaggaagagttgaaggccaagaccaagacaagaaag
aagaaggttgatctgaggattacagaagatgacgattatcaagatctgatgacgtcggag
gagagtgatgcatacaatagtgatgatgatgaaccagctgccaaatcaaaatcaaagaaa
aagggagcgaagaagagaaaaagcaagaaaaagaagcaagattccgatgatgaaggggaa
gaggaaagtgatgagggagattttgaaggcaaggaactagactacatctcggaggactca
agtgatgaggaggaggagcaaaagaagattgacatcatgggtcttgatgaagagttacac
aagattgaagaggaggaggaggaggaagaggaggaggacaaagagaaagaagaggagaaa
aaagacgagatgaaccgaggaaaaaccgaggagaaagtcaaaaaggaaggggagagcagc
tccagtagttcagactctgatgacagcgacatcgacgataacaaaattcactcagctatg
ttaatgcagcagaagaaaccgtccaagaggccagccactccacctagccagaaaacgccc
tcaaagacatctagtcggagtgcgagcagaccggagacgccaacacagaacgcaaatacg
aacagcacagcgacgtcaagtacactttctgatgcggcgaataaactgcaagacagagta
tcattaaagaggccaggtactgatgaagctcactcttcaaagcgacataaaacagaagag
agtgcatcagcgtcaaggatagcggggaaggagacggttgggttgaccgaggatgtcata
agacgatacctcatgcgaaaacccatgacaaccaaagacctcctctacaaactcaaatcc
aagaagatcggactcaagtcagacgtgcttgtcaaacagttcactgaaatcataaggaag
ttgaaccctcagcagacaaagattaaaggaaagacgtactggttcatcaaacaatga
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