Luidia clathrata (European starfish): 117298437
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Entry
117298437 CDS
T10152
Name
(RefSeq) ATP-dependent RNA helicase eIF4A-like
KO
K03257
translation initiation factor 4A
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117298437
03012 Translation factors [BR:
arun03012
]
117298437
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arun04147
]
117298437
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117298437
mRNA cycle factors
Stress granule specific factors
117298437
Translation factors [BR:
arun03012
]
Eukaryotic type
Initiation factors
eIF-4
117298437
Exosome [BR:
arun04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117298437
Exosomal proteins of bladder cancer cells
117298437
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Flavi_DEAD
Cas3-like_C_2
P1
Motif
Other DBs
NCBI-GeneID:
117298437
NCBI-ProteinID:
XP_033637589
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All DBs
Position
13:8414199..8423221
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AA seq
429 aa
AA seq
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MSNDHQQHEDSVSEPQQTSAGSGNAGDFAKQPKETNRNNEVHEHIEGSESLEVIESFDDM
GLPDELLRGIYAYGFEKPSAIQQLAIKPCCQSKDVIAQAQSGTGKTATFAISILHQIDIS
RENCQALVLAPTRELATQIQKVFIALGDYLKASCMACIGGTNVATDISKLKNGVQVVVGT
PGRVFDMIGRNALDTTYIRMFVLDEADEMLSRGFKDQIYEVFTQLKHDNLQVILLSATMP
DDVLEVTTKFMVNPIRILVKKEELTLEGIKQFYVNVEKEDWKFETLCDLYETLTITQAVI
FCNTRRKVDALQEKMKQKDFTVSSLHGDMEQKDRDVIMKEFRSGSSRVLITTDLLARGID
IQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTADDLRALRELQQFYHTVIDE
MPMNVADLI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgatcatcaacagcacgaagattctgtgtcagaacctcagcaaacttccgct
ggttctggaaatgcaggagactttgccaaacaacccaaggagaccaaccgtaacaatgaa
gtgcacgaacatattgaggggagtgagtccctggaggtgattgagtcctttgatgatatg
ggcttacctgatgaattactcagaggtatctatgcttatggttttgagaaaccgtccgct
attcagcagcttgctattaagccatgctgtcaaagcaaagatgtgattgctcaggcccaa
tctgggaccggcaagacggcaacctttgccatctcgatccttcaccagatcgatatatcg
agagaaaactgccaagctctggtcttggctcctaccagagagttggccacacagatccag
aaggtcttcattgctcttggagactacctgaaggcctcctgcatggcctgcatcggtgga
accaatgtggccaccgatatctccaagctgaagaatggtgtgcaggttgttgtaggcacc
cctggccgtgtgtttgacatgattggccgcaatgccttggatacaacctacatcaggatg
tttgtcctcgatgaggctgacgagatgttgtcaagaggcttcaaagatcaaatctacgag
gtcttcacccagctgaagcacgacaacctgcaggttattttgttgtcggctacaatgcca
gatgatgtactggaagtgaccaccaagtttatggtcaacccgatccgcatcctcgtcaag
aaagaggagcttaccctggagggtatcaagcagttctacgtcaacgtagaaaaggaggac
tggaagtttgaaactctatgtgacttgtacgagacactgaccatcacacaagcagtaata
ttctgcaatactagaaggaaagtcgacgcccttcaagagaagatgaagcaaaaggacttc
accgtctccagcttgcacggagacatggaacagaaggatcgtgatgtgatcatgaaggag
ttccgttcaggctctagccgtgtcctgatcactactgacctgctggctagaggtattgac
atccagcaggtgtctctggtcatcaattatgaccttccctctaacagggagaactacatt
cacaggattggtcgtggtggccgattcggccgtaagggtgtggccatcaattttgtgaca
gcagatgacctgcgagctttgcgtgagttgcaacagttttatcatacggtgatcgacgag
atgccgatgaatgtggccgatctgatttaa
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