Luidia clathrata (European starfish): 117299282
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Entry
117299282 CDS
T10152
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun00900
Terpenoid backbone biosynthesis
arun01100
Metabolic pathways
Module
arun_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117299282
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
arun01006
]
117299282
Enzymes [BR:
arun01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117299282
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
117299282
Prenyltransferases [BR:
arun01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117299282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Terpene_synth_C
DUF6568
Motif
Other DBs
NCBI-GeneID:
117299282
NCBI-ProteinID:
XP_033638659
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All DBs
Position
14:complement(1242009..1253193)
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AA seq
427 aa
AA seq
DB search
MTQITSMLGRNLRFILDSGFLTGRFFGGGAVSSRSWVNIVPSTACPIRKAGRCTSVINHG
VYRNRSGNINIKIGQYRFMMASNTAMDAERFGDVFQELVKDIVGDDESNPEIRDAALRFE
KMLAYNVPHGKRNRGLTTVASFRHLAKPSQMTDENLHKAMVLGWCVEWLQAYFLIADDIM
DQSKTRRGQPCWFRKSNVGMDAINDSFFVETAIYKLLKKHLANELYYVNVLEMFHETTYQ
TVIGQSLDLITSPEGNKDLNRFTQQRYDAIVKWKTAFYSFYLPVALAMFMVGISDEESHK
NAKIILLQMGHFFQVQDDFLDCYGNPEVIGKIGTDIEENKCSWLVVQALKAATQEQREVL
EENYGIDNPAKVAMVKSLYKDLNLETVYRNYEEQSYNDLQQLIDKHMGQLPKEMFIAYAK
KIYKRQK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaattacttcgatgctgggtcgaaacttgcggtttattttggattcggggttt
ttaacgggacgattttttggaggcggagctgtctcttcacggtcgtgggtgaatatcgtc
ccatccacggcatgtccaatcaggaaggcgggtcggtgtacgtcagtcatcaatcacggt
gtttatcgtaataggtcgggaaatatcaatataaaaattggacaataccgtttcatgatg
gccagtaacacagctatggatgcggagaggtttggtgacgtcttccaagaattggtcaaa
gacatcgttggagacgatgagagtaatcctgaaattagagatgctgcacttaggtttgaa
aagatgttggcctacaatgtcccgcacggcaagaggaatcgtggtctaacgaccgtcgcg
tccttcagacatcttgcgaaaccgtcccagatgactgatgagaacttacataaagcaatg
gttcttggctggtgtgtagaatggcttcaagcgtactttctgattgccgatgatataatg
gaccagtccaaaacgagaagaggacagccatgctggttccgtaaatcaaatgttggtatg
gatgccataaacgattccttcttcgttgagaccgccatctacaagttattaaagaaacat
ctggcgaatgaactgtattacgttaatgtgctggagatgtttcacgagaccacgtaccag
acggtcatcggtcagtccttggacctcatcacatccccagagggcaacaaagatctcaac
agattcacccaacaaagatatgatgcaatagtgaaatggaagacagcattctattcattc
tacctcccggtggcactggccatgtttatggttggaatatcggatgaagagtcgcataag
aacgccaagataatcctgctgcagatgggccactttttccaggtccaggatgacttcctc
gattgctacggcaacccagaagtgatcggcaaaatcggaacagatattgaggagaataaa
tgcagttggttagtggtgcaagctcttaaggcagcgactcaagaacaacgcgaagtatta
gaggaaaactacggcattgacaacccagcaaaggttgccatggtaaagagtttatacaaa
gacctcaacttggaaacggtttaccgcaactatgaggagcagagttataacgacctccag
cagctgattgataaacacatgggacagctacccaaagaaatgttcattgcttatgccaaa
aagatatacaagaggcagaaataa
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