Luidia clathrata (European starfish): 117299517
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Entry
117299517 CDS
T10152
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
arun03009
]
117299517
03012 Translation factors [BR:
arun03012
]
117299517
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117299517
5.6.2.5 RNA 5'-3' helicase
117299517
Ribosome biogenesis [BR:
arun03009
]
Eukaryotic type
Other ribosome biogenesis factors
117299517
Translation factors [BR:
arun03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117299517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
ResIII
Flavi_DEAD
nSTAND3
SLFN-g3_helicase
AAA_16
DnaB_C
Viral_helicase1
AAA_22
DEAD
AAA
Helicase_RecD
PhoH
cobW
UvrD-helicase
ABC_tran
RuvB_N
SRP54
AAA_7
NPHP3_N
UvrD_C_2
CbiA
AAA_14
NTPase_1
Motif
Other DBs
NCBI-GeneID:
117299517
NCBI-ProteinID:
XP_033638955
LinkDB
All DBs
Position
14:9980647..10002238
Genome browser
AA seq
1097 aa
AA seq
DB search
MAVRNFVQKHTELLSLEREAEIAETSALIENTPLKELQRRGVCLLKLHLVNQSTGLYGRT
LVKFAPNKGRGDGNLPAHNLNPGDIVGVGQSHGGGASSTDDPSGIVSKVTKAAITVAFDH
KDTEDGPVTFDHEGLYRLTKLANDVTYRRLKKALQSLDSYTTGPASHLIDVLFGEANVRP
QTRPDQPSSDQTGSSDFQLFNENLDQSQQDAMTFALSQRDVAVIHGPPGTGKTTTVVEII
RQAVKQKLKVLACAPSNIAVDNLVERLAASKVRIVRIGHPARLLPSIQKYALDAIVASSD
EARIVQDVRKEIDQTRIQLSKSKQGKEKRHLRDEAKILRKELRERERHAIREILQRADVV
LATNTSASLSGPLSYLPEDHFDVVVIDECAQAVEASCWIPLMYAPRCILAGDHQQLPPTI
LSDKAASDGLAVSLMERAVNLHSDQITKMLTTQYRMNAAIMQWSSDELYDSKLIAADSVS
SHLLSDLPGVEATEDTSVPLVLIDTTGCDLYELEVESEVSKGNEGEADLVVVHVERLLAT
GLAASEIAVIAPYNLQVELLRLRLSGRHRSVEIKSVDGFQGREKEAVVISLVRSNSRGEV
GFLAEDRRINVAVTRARRHVAVICDSETVSHHGFLKNLVEYMSANGEVRSAFQYQEEIDI
SEYTRPDHLILRQSKQSSGAEKGTRPKQPRPQAKHYNIPGNKERTFDAEASAKKEIELTE
QVQRFSRDQTKDEIQFPSSLNSHDRLVVHQLSEKLGLNHFSVGEGKERHITISKKPIAAE
ESKVDSSQDTLGEKSLEDANDVGSTGTDSNVDVIIEELRTKNPMEAIGDLALDAQEVLTH
NAEGSFVDCGHETHSNHVADLSNVECVNNLKVSTKATEHSSKTKKLSTEAQEQSTKSMKL
STEAQEQSSQTTKVQTPEVKEPVEKIDLYKCKFCKKKLPAGNVFLHEIHCEKVTEDKQRL
KDASAGAKKKMDKSKQRNLLEKTTEEDFDALIAIAIKSDTRCNYVKCKEKISLTGILCQF
CNRRYCFGHNMPEVHGCTEMARAHARKVVHREKVVRAGSGVKERKVDPNVRAHLERQLDK
KRNEMAEKRTRKSSKKK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaagaaatttcgtccagaaacatactgagctactctccttagaaagagaagcc
gaaatagctgaaacaagtgcattgattgaaaacacacctttgaaggagctgcagaggcga
ggggtttgtcttctgaagctacacctagtcaaccaatccaccgggctctatgggagaacg
ctggtcaagtttgcacctaacaaggggcgtggtgatggcaacctacccgctcataacctt
aacccaggagacatcgttggagttggccaatctcatgggggcggagcctcctcaacagat
gatccatcaggcatcgtgtcaaaggtcaccaaggcggccattactgttgcctttgaccat
aaagataccgaggatggtcctgtgacctttgaccatgaaggactgtacagattgaccaag
ttggctaatgatgtcacgtatagacgcctgaaaaaggctctacaaagccttgattcttac
accaccggcccagcaagtcacctgattgatgtgttatttggtgaggccaatgtcagacct
cagacaagaccagatcagccttcttcagatcagacgggttcatccgactttcagttgttc
aatgaaaacctggaccaatcgcagcaagatgcgatgacctttgccctctcccaacgagat
gttgccgtcatccacggtcctcctggaactgggaaaacgacaacggttgtagaaattatc
agacaagcagtcaagcagaaactgaaggttctggcgtgtgcaccgtccaacatagctgtt
gataacctcgttgagaggctggctgcaagtaaagtccgcatcgtgcgtatcggccatcca
gccagactcctgccgagcattcagaagtacgccctcgacgccatcgttgcgtccagtgac
gaggcaagaatcgttcaagatgtgcgcaaagagattgaccaaacaaggattcagttatcc
aagtccaaacaaggcaaggagaaacgtcatctccgggacgaggctaagatcctccgcaag
gagctgcgagagcgggaacggcacgccatccgagagatcctccagcgtgccgacgtcgtc
ttagccaccaacaccagcgcctcgctgtctggaccgctgagctacctccctgaggaccat
tttgatgtggttgtgatcgatgaatgtgctcaagctgtagaggctagttgctggatccca
ctcatgtatgctccgcggtgtatcctagctggcgaccatcaacagctaccaccaactatt
ctctcagacaaagctgcatccgacggtcttgctgtgtccctcatggagagagccgtcaac
ctccactcagatcaaatcaccaagatgctgacgacccagtatcgtatgaacgctgccatc
atgcagtggagctcagacgagctctatgatagtaagctgatcgctgcggactcagtctcc
agccacctcctctcagacctccctggggtggaggcgacggaggatacctcagtccctctg
gttctcatcgatacgacagggtgtgacttgtacgagcttgaggtagagtcagaggtgtct
aaagggaacgagggggaggcggacctcgttgtggttcatgtagagagacttctagccact
ggattagcggcatcagagattgcggtcattgccccgtataacctacaggtggagttgttg
agactgcgactgagcggcaggcatcgtagtgtagagatcaagtcagttgatggcttccag
gggagagagaaagaggctgtggtcatatccctcgtcaggtcaaatagcagaggggaagtt
ggtttcttagctgaagatcgtcggatcaacgttgcggtgacccgagcccgtcgtcatgtt
gcagtcatctgtgattccgagacagtcagccatcatggattcctgaagaatctagtggag
tacatgtcggccaacggggaggtcaggagtgccttccaatatcaagaagaaattgacatc
agcgaatatacaagaccggatcatctcatcttgagacaaagcaagcaatcctcaggtgcc
gagaagggtaccagaccgaagcaacctcgaccccaggcaaagcattataacatccctggg
aacaaggaaaggacgtttgacgctgaagcctctgcaaagaaagagattgagttgacggaa
caagtgcagcgcttctcccgagaccagactaaagatgaaatccagtttccatctagtctc
aactcccatgatcgactagttgttcatcagctttcagagaaacttggactgaaccatttc
agtgtgggggagggtaaagaaagacacatcaccatcagcaaaaagccaatcgcagccgag
gaatctaaagtcgactcatcccaggatacattgggggagaagtctctcgaagacgcaaat
gatgtgggttcgacgggaacagattcaaatgttgatgtcatcattgaagagttgagaact
aaaaatcccatggaagccatcggtgatttggctctggatgctcaagaagttttaacccac
aatgctgagggaagttttgtagactgcggccacgaaacacattcgaatcacgttgcagat
ttatcaaatgtggagtgtgtgaacaacctcaaagtatctacaaaagccacagaacactct
tcaaaaaccaagaaactgtctacagaagcgcaagaacaatctaccaaatcaatgaaactt
tctacagaagcccaagaacaatcttcacagacaacgaaagttcagacaccggaggtgaaa
gagcccgttgagaagatagacctttacaagtgtaagttctgtaagaagaaactcccagcc
ggaaacgtcttcctccacgaaatacactgcgagaaagttacagaggataagcagcgtctt
aaggatgcgtctgctggagccaagaagaagatggataagagcaaacagcgcaacctcctt
gagaagaccacggaggaggactttgacgctcttattgccatagcgatcaaatccgataca
agatgcaattatgtaaaatgcaaagagaagatctctctgactggaatcctgtgtcagttc
tgtaaccgtcgatactgcttcggccacaacatgccggaggtgcacggatgcacggagatg
gcgagggcgcacgcccggaaggttgtccatagggagaaggtcgtcagggctgggagtggg
gttaaggaacgcaaggtggaccctaatgtccgggcgcacttagaacgacaactggacaag
aaacgaaacgagatggcagagaaacggactagaaaatcatctaagaagaaatag
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integrated database retrieval system
