KEGG   Luidia clathrata (European starfish): 117299698
Entry
117299698         CDS       T10152                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:arun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117299698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arun03400]
    117299698
DNA repair and recombination proteins [BR:arun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     117299698
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH
Other DBs
NCBI-GeneID: 117299698
NCBI-ProteinID: XP_033639145
LinkDB
Position
1:complement(13553472..13572972)
AA seq 605 aa
MKRAASTHDISDSDSGDDDGSSEEISQSLLTRKDKKSLDKKHLQFGSKGSSQGSPFDTKS
YKIPKRSNSSPASTSKPSNKEDKPKCPFGAKCYRKNTDHRRDFIHSDNDEHGMPPTKKLK
RDDSMKASSSSSATSPASSSSSSRKRTCINVIGEASPLNFLLTKVTGIPEKHNNSQAVHI
SDILAPCMGELVASVQFNYIFDIPWLMKQYPAQSRSKPLLIVHGEQRQSKVALHEAAHPY
PNIKLCQAKLDIMYGTHHTKMMLLLYTNGMRVVIHTANIINQDWFQKTQGVWISPLFPKT
DSTSTSTDSPTLFQRDLAEYLTAYRSPSLQEWIGHIRSHDMSEAKVFISASVPGRHTGSN
MNKWGHLKLRQVLKDRGPKESDVKSWPVIGQFSSVGSLGPDKDKWLCSEWLQSMAQCRGV
GRKMQGESGNKMLKLIFPSKDNVRTSLEGYPAGASIPYGIKTAKKQLYFNSFLHQWVSNS
RGRSRASPHIKTYSRMSPDSQHIAWFLVTSSNMSKAAWGALEKNGQQLMIRSYEMGVLFL
PDIFASETTRFAVSRSAASEDSELVFPLPWDTPLVPYSKEDRPWVWDIAYTDLPDPHGNC
WVPPT
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgaagcgggctgcatctactcatgatatttctgactcggattcaggggatgatgatggt
tcatctgaagagatctcccagtcattgttgacaagaaaagataaaaaaagcctggacaag
aaacatctgcagtttggctctaaaggatcaagccaagggtcaccatttgacactaaaagt
tataagatccctaagagaagcaactcctcaccggcatccaccagtaagccatctaataaa
gaagacaaacccaagtgtccattcggagccaagtgctaccgcaagaataccgatcatcga
agagacttcatacattcagacaatgatgagcatgggatgcctccaacaaagaaattaaag
agggatgactcgatgaaagcatcctcctcctcgtcagcaacatctcccgcatcatcatca
tcatcatcaaggaagaggacttgcataaatgtcatcggagaagcctccccactcaacttc
ctcctgaccaaagtgacgggaattcctgagaaacacaacaactcccaagctgtacatatc
tctgatatcttagctccgtgtatgggggagctagttgcatcagttcagttcaactacata
tttgatattccgtggctcatgaaacagtatcccgcacaatccaggtctaaacctttactg
attgttcacggagagcagagacagagtaaagtagcgctgcatgaagccgcccatccgtac
cccaacatcaaattgtgccaagctaagctcgacatcatgtatgggacccatcacactaag
atgatgctgttattgtatacaaatggaatgcgtgttgtgatccacacagctaacatcatt
aatcaagactggtttcaaaagacacagggggtatggatcagtccgctcttcccaaagacg
gattctacgtcaacgtccacagactccccgactttgtttcagcgagatctggctgaatat
ctgactgcataccggtcgccatcattacaagaatggatcggacatatcaggagtcatgac
atgtctgaagccaaggtatttatcagtgcttccgtacctggcagacacacaggcagcaat
atgaataaatggggacatctcaaactacgtcaggtactaaaagaccgtggacctaaggag
tcagatgtgaagtcttggcctgtgattggtcagttctccagtgttggctccctaggtcct
gacaaagataaatggctgtgtagtgagtggctacagagtatggcgcaatgcagaggtgtt
ggtaggaagatgcagggggagtcagggaacaagatgttgaagttgatcttccctagcaag
gataatgttcggaccagtctggagggttacccagctggggcctccataccttacggcatc
aaaacagcaaagaaacaactctacttcaattcattcttacatcagtgggtttccaactct
agagggcgttccagagctagtccacacatcaagacatactccagaatgtcacctgatagt
cagcacattgcttggtttcttgtgacgagctccaacatgtctaaagctgcttggggtgcc
cttgaaaagaacggacagcaactcatgatcagatcctatgagatgggagtcctcttcctt
ccagatatctttgcatcagagacgacaagatttgctgtgtccagatcagctgcctccgag
gatagtgagctggtgtttcctctgccttgggacacaccattagtgccctattccaaggaa
gatcggccgtgggtgtgggacattgcatacactgaccttccagatcctcatggtaactgt
tgggtacctccaacttga

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