Luidia clathrata (European starfish): 117299845
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Entry
117299845 CDS
T10152
Name
(RefSeq) integrin beta-1-like
KO
K06588
integrin beta 5
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04145
Phagosome
arun04148
Efferocytosis
arun04512
ECM-receptor interaction
arun04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
arun04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117299845
Cell adhesion molecules [BR:
arun04515
]
Integrins
Integrin beta subunits
117299845
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
117299845
NCBI-ProteinID:
XP_033639284
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Position
15:5581237..5622233
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AA seq
830 aa
AA seq
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MGGHTRQRQHQFSAVVVLVLLSTQCCSQVTETVPKEPSELEDNVCSGGRTCGDCTAIDPT
CGWCAQQGYTEDTGFLRCDLLQNLINKTCLDITYPVSSVGIEENEELRDADPVLGDPVQV
APQKIRLKLRPGQSVNLSVSVRQARDYPVDLYYVMDLSGSMKDDLENLKQLANTLAEEMG
EITRNFRLGFGSFVEKTLSPFVNTAPSSLLEPCPDCQPPYNFRNHLPLDVNTDLFSDRVN
ETSYSGNLDSPEAGLDALMQITVCKELIGWLPKARHIVVYVSDDAFHIAGDGKLLGIVNP
NDGECHLNSETGYNDRANEFDYPSVGHLNFRMREQNVIPIFAVTASHTGLYRELANFIEG
STVGILAPDSSNVVALIKENYDKITSKVQISDNAPENLAVTYTSRCLDEAPNPGSKVCLG
LKLGEVVSFDVTVEATSCHDNTEQSFNIGPIGFEEALEISVVVTCSCDCEDLSIPNSDYC
SNGNGTLSCGQCVCDAGRYGKLCECSSGEDIEVSFRDKYENVASCRASSNSSIACSGRGE
CICGECACFERPDKKEVISGRFCECDNFSCERYKGQLCGGPDRGQCVCDEKSRRSVCKCK
PGFSGDACDCPISTAGCVASNGLMCNANGVCECNRCKCDANSPFKGSTCETCKTCIGKCS
SYRPCVECKIFGSDVISPEECDKCTVAVVIDSELPNVNVSNLCVFPGGFTNCSTSYNFVY
ETLGNGTVLVHLQDQPRECDPNGGGGDNGKTPIATDPTSGDILILVLSIVGAIVFIGVIL
LILLRLLTYLHDKREFTRFTKEQQSAVWDEAQNPIYKPSTSTYVNPLYGK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggtggccatactcggcaaagacaacaccagttttccgctgttgtagttctcgttcta
ctatcaacacagtgttgctcacaagtaacagaaacagtacccaaagagccgtcggaattg
gaagataatgtatgctctggagggaggacttgcggggactgtactgccattgatcccaca
tgtggctggtgtgcacaacagggttatactgaagataccggcttcctaagatgtgatcta
cttcagaacttaatcaacaaaacatgcctcgatattacctacccagtcagcagtgtcggc
atagaagagaatgaagagctaagagatgcagatccagttctaggtgatcctgtccaagtt
gcaccccagaaaatcagactgaaactacgacctggtcaaagtgtgaatctgagtgtatct
gtgcgccaggcaagggattacccggtggacctctattacgtcatggatttaagcggatcc
atgaaagatgatttagaaaatctcaagcagttagcaaatacactagccgaggagatgggg
gaaattacgagaaacttccgacttggttttggctccttcgtcgagaaaacgttatcaccc
tttgtaaatactgctcctagcagtcttttagagccgtgtccagattgccagccgccttac
aacttcagaaatcacctccctttggacgtgaacacggacttgttttcggacagagtaaat
gagacctcatactctgggaacctggacagtcccgaggccggtctggatgcccttatgcag
atcacagtatgcaaagaattaataggttggctgcctaaagcaagacacatcgtggtttac
gttagcgacgatgccttccatattgctggcgacgggaagttacttgggattgtgaatcca
aatgatggagagtgtcacctgaatagtgaaacaggctataacgacagggccaacgaattt
gattatccgtccgttgggcatttgaacttccgcatgagagagcagaatgtcattcctatt
ttcgcggtaacggcgagccacaccggcctttaccgggaactcgcaaatttcatcgaggga
tcaactgttggcatcttggccccagactcttctaacgtggtggccttgatcaaggaaaat
tacgataaaatcacctcaaaggtgcaaatctccgacaatgctccggaaaacctagccgtt
acctacacgtctcggtgtctggacgaggcgccaaaccccgggtccaaagtctgccttggt
ctcaagctaggtgaggttgtcagttttgacgtcacggtggaagctaccagttgccatgac
aataccgagcaaagtttcaacatcggaccgattggttttgaagaagctttagagatctca
gtggtagtgacatgcagctgtgattgcgaagatttgtcgattcccaacagcgactattgt
tccaatggaaacggtacgttgtcttgcgggcagtgtgtgtgtgatgcaggacgttacggt
aaactctgtgagtgtagcagcggtgaagacatcgaggtatcattcagagacaagtatgag
aacgtggcatcgtgtagagcgagcagtaactcgtccattgcgtgttctggacgaggtgaa
tgtatatgcggggaatgtgcttgctttgaaagaccggacaagaaagaggtgatatctgga
cggttctgtgagtgtgataacttctcatgtgagcggtacaaagggcaactatgtggaggg
ccagaccgaggccagtgtgtatgcgatgaaaagagcagacgcagtgtttgtaaatgcaaa
ccaggtttcagtggtgacgcatgcgactgtcccatatcaaccgctggatgtgtggcttca
aatgggctgatgtgtaacgccaacggggtatgtgaatgcaaccgctgcaaatgcgatgca
aactcgccatttaaaggttccacatgtgaaacatgcaagacctgcatcggtaaatgttct
tcttaccgcccctgtgtggagtgtaaaatcttcggtagcgatgtcatctcgccggaggaa
tgcgataagtgcacggtggccgttgtcattgacagcgagctgcccaatgtgaatgtgtcc
aatctatgcgtgtttcccggcggcttcaccaactgttcaacatcctacaattttgtttac
gagaccctgggcaacggtactgtgttggttcacctacaagaccaaccaagagagtgtgat
ccaaatggaggcgggggcgacaacggtaaaactcccattgcgactgaccctacgtcaggc
gacattctcatcctcgttctcagcatcgtgggcgccattgttttcataggggtcattcta
cttatcctgttgagacttctgacgtatctgcacgacaagagagagtttactcgatttacg
aaagagcaacaatcggcagtctgggatgaggcgcaaaatccaatctacaagccctctacg
tcgacctatgtcaacccactctacggaaaataa
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