Luidia clathrata (European starfish): 117299911
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Entry
117299911 CDS
T10152
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04512
ECM-receptor interaction
arun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117299911
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117299911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
arun04515
]
117299911
Cell adhesion molecules [BR:
arun04515
]
Integrins
Integrin alpha subunits
117299911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
LRR_5
TM7S3_TM198
Motif
Other DBs
NCBI-GeneID:
117299911
NCBI-ProteinID:
XP_033639394
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Position
15:complement(10608073..10625931)
Genome browser
AA seq
1051 aa
AA seq
DB search
MYNMNRLKDIAPMLMRTLLIVSGILLWENGSYAFNMDTDKAIVHGGTNGSLFGYTVAFHR
EGNINMLLVGAPRAQTSQPDVNKGGAVYRCPVSAGDCQQIDFDTTGHPMNEAGQQVGSKS
HQFFGATLQSSGPDGVVVACAPRRVWSVTNFASPDSRRYPNGACFTATNNFSDIQEFTPC
IDPSEPGVHKISACEAGFSAAVTEDLQLILGGPGSFYFQGQVISVALNSPDVQFTPEREL
SFDNFYRGYSVVTGRFGPTGVYAASAPRGKGLLGRVSVLNEDLTDTDIEIFGSQVAAYFG
HALVATDVNNDGFDDLIIGAPMYVDPDNLIERWEVGQVHVYCQNALGKFTETDTLTGTHP
GGQFGFSIAALGDINYDDFNDIAVGAPYADDGIVYIYQGRRKGIKQTVSQILRPSDFGLN
IKSFGTSLTGGMDMDGNEYKDMMVGASASSTAVLVRARPIVKVQKTLSFEPEQINLDVKD
YRLPIGRMATSFNVTACFSTRGMGIPGNIDVQYSLELDVSLTTTDRAAFVQENNLESSKL
TRTIQLIKDDSFKCQKHLAYVKIVIQEKNFPISVRLTYELASSMTNPMDPVTSEVQPILN
ELPVPVLVEPLLIQNTCKNYLCVPDLLLTAKTTTDNVALGDDWELSIDVDVTNYGEDAYE
SSFTAVLPEGAAFARLQRISKDLSVECLADENTGEVECDIGNPLPEEHTVSFRLIIRNDG
LSGAASMFTIEMSVDSYNYEPRNISGDNYANVTVGVYAAAELSLFGISAPQQVLFFFPNE
SQIMSLEEPETEQEVGPEVQHLYMLRNLGPSEIGETEVKIFWPLVDADGDYLLYLISANL
GTGEACTVEGGVNPDDLELQPVIINDTSSRKRRQAADDGTSEAIPQSQTVQTIECSTKSS
FCVAITCTVVAPSGAGADKDSAFVRIKSRMYEKTFFENKYSEVLITSMATATVLEMPYMQ
SLLPDKFPVAYSEVSTQVIGQSNSVIPGPRVTNIPLWAYIVAVIGGGLLLAIIFFIMWKV
GFFKRKKIVPGDPQAAAQENWQNDVLVPEKK
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgaaccggttgaaagacattgcaccaatgctaatgaggacactactgatt
gtgagtggaatattgctatgggaaaatggcagttatgcattcaatatggacacagacaaa
gctatagtgcatggaggaaccaatggcagtctgtttggatacacagtggctttccacagg
gagggtaacatcaacatgctattagttggggcaccgagagcccaaacctcccaacccgac
gtgaataaaggaggtgccgtctaccgttgccctgtatcggccggagactgtcaacagatt
gattttgacaccacaggtcatcctatgaacgaagccgggcaacaagttggtagcaagtca
catcagttttttggagcgacgttacaaagctctggtcctgatggtgtcgtggtggcatgt
gctccacggagagtatggtcggtaaccaactttgcgtctccagactctcgacggtatccc
aatggtgcatgtttcactgcgaccaacaacttcagtgacatccaggagtttacgccgtgc
atagatccatctgagccgggggttcataaaataagtgcatgtgaagctggattcagtgca
gctgtcacagaggatcttcaattaattcttggtgggcccggaagcttctacttccaaggc
caagtgatatctgtcgccctcaactcaccagatgtgcaattcaccccagaacgtgaatta
tcatttgataatttctatcgcggttactctgtcgtcactggtagattcggcccgactggg
gtgtatgccgcgagtgcaccccgcggtaagggactgcttggacgggtgtcagtattgaac
gaggacttgactgatactgatattgaaatttttgggtcgcaggttgctgcctacttcggt
catgctttagtcgccacagatgtcaacaatgacggatttgacgatttgattatcggagcg
cctatgtatgtggatccagataatctaattgaaagatgggaagtcggccaagtgcacgtt
tactgccaaaatgcactgggtaaattcacggaaactgacacattgactggtacccacccg
ggaggtcaatttggattcagtattgctgcactaggagacatcaactacgacgatttcaat
gatattgccgttggagctccgtatgccgatgacggaatcgtctacatctatcaggggcgg
cgaaagggaataaagcagactgtctcccagatcttacgaccgtctgatttcggcttgaat
ataaaatcatttggaacgtcactaacgggtgggatggacatggatggtaacgaatacaaa
gatatgatggttggagcgtctgcatcgtctaccgctgtgcttgtcagggcacgaccgatt
gtaaaagttcagaaaacattgagttttgaaccagaacagattaatcttgatgtcaaagat
tacagattaccaatagggagaatggcaacgagcttcaatgtgactgcatgtttctcaaca
agagggatgggaataccaggcaatatcgatgttcagtacagtctagaattagacgtaagt
ttaacgaccaccgatcgagcagcattcgttcaggaaaacaatttggagtcatcaaagctt
actcgaacaattcaactcattaaagatgacagcttcaagtgtcagaaacatctagcctat
gtcaagattgttattcaagagaagaacttccctataagtgttcgtctaacctatgaactt
gcttcttcgatgactaaccccatggatcctgttacctcagaagtgcaaccaattctaaat
gagcttccagtgcctgttcttgtggaacccctgttgatacaaaatacatgtaagaattac
ttgtgtgttccagacctcctgctgaccgctaaaaccactactgataatgtggcattgggt
gatgactgggagctaagcatcgacgttgatgtcacgaactatggtgaagacgcttacgaa
agctcctttacagctgtcctaccagagggtgcggcattcgccagactccaaaggatctcc
aaggatttatccgtagagtgtctggcggatgaaaacaccggagaagtggaatgtgacatt
ggaaacccgcttcctgaggagcatacagtgagttttagactgattataagaaatgatgga
ttgtcaggagctgcttctatgtttacaatcgagatgtctgtggatagttataactatgaa
ccgaggaacatcagtggcgacaactatgctaatgttaccgtcggagtatatgcagcagct
gagctatcactttttgggatatctgcaccacagcaagttcttttcttctttccaaatgag
agtcaaattatgtcattagaggagcctgaaacagagcaggaggttgggccagaagtgcaa
cacttgtacatgcttcgaaatcttggaccaagcgagattggagaaacagaagttaaaatc
ttctggccacttgtagatgccgacggggattacttactgtatctgatcagtgccaatctc
ggaactggagaggcatgcacggtagagggcggtgtgaatcctgatgacttggagctgcag
ccagttatcatcaacgataccagttcacgtaagcgacgtcaggctgccgacgatggaaca
tcagaagcaataccccaaagtcaaactgttcagacaatcgaatgtagtacaaagtcgtca
ttttgtgttgcaatcacgtgcacggtcgtagcacccagtggtgctggtgcagataaagac
agtgcgtttgttcgaatcaaatcaaggatgtatgagaaaacattctttgagaacaaatac
agcgaagttttgattacgtcgatggctactgctactgtgcttgagatgccatacatgcag
tcacttcttcccgataagttccccgtcgcttattctgaggtttctactcaagtaattggg
cagagtaattccgttatcccagggcccagggtgactaatattcctctgtgggcgtatatt
gttgctgtgattggtggtggtctacttctagctattatcttcttcataatgtggaaggtt
ggatttttcaagaggaaaaagatcgttcctggtgatcctcaggcagcagcccaggagaat
tggcagaatgatgttctagtccctgaaaagaaatga
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integrated database retrieval system
