Luidia clathrata (European starfish): 117300174
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Entry
117300174 CDS
T10152
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16-like
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
arun
Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arun03021
]
117300174
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
117300174
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Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
117300174
NCBI-ProteinID:
XP_033639785
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All DBs
Position
15:complement(4908318..4928144)
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AA seq
850 aa
AA seq
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MELVYVSEWPKTDANLCTKKLIGDTACSWSCRNILAFSTLNNSKGLAERELYRPKIHVVD
PDRPWELHSISGVHKDLIQVLQWNASGTRLLSGDSSGTSVLWQMKDHLLNDWESVAESHV
NGEPIVALGWLHNGVKISYNVDNIDSPSMLDKFTRSRFTPSLLQVGTKPAVGWIAVTSTG
LVSVTILKSGGGTSTFTECLGNTRCHAELADIAYSSSGDILIATSDGSCRSPVQVYKVNL
SWRDDKVFIETDYLPSLHVQCCVDLNNKDKYLTITHLRFINKECYEEESTSVPAEQLIIS
AIGSSGSCVEFWSLSKEFVPLNKIFQTSPPPSRESQPTTQKWVFGTCYTNSSAVTGLCLP
KLPVKLSSKSIYNGPGMVMAVAFQDGSVKLLHRVSLKPCASFKYEGAKVDTGSQAKRQKV
YNGKHLMCMEMSSTCCSIMAVDRMGALCLIKIAPTLGQALDQGAARAHTIAQVVNLLEYS
LVTGYEWWDLLHTITPGMVDTVIDRLTEAFNRQSKSTQELLFSRLVAVKASLHRMTSSGA
GKSVDCYCKLLLNAISSEFRSLLRPTSVTAQDKGPAEKLTAICAHSTELDLTKLMLNIDT
KDYALDPNFIQSLQQLVQWIAEYCLYTLSTVPQQASNPTKPGISVLRDTSTLCLLREMLV
LIKIWGIRKKTCLPVFSTTSDSLDTLSHLYKLMTHVWLASKEIPPAELDENTVDECCLLP
SQIMMHPLDVTPVTEGITGKLLLLRQAMSFQFNTTPPHMVNIATFGHSLNIFPGSEVNVR
SLSDKIHQKTDVVRRLYLGVAPPDEIRSCTRCSSISMLNSPTRTVIMKAWEQRWARSCLC
GGLWRRVVMA
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggagttagtttatgtttcggaatggcctaaaacagacgcaaacttatgcaccaagaag
ttgattggagacactgcctgcagctggtcgtgtcgtaacatcctggcattcagcacgtta
aacaacagtaagggtctagcagaaagggagctctaccgacccaagatacacgtcgttgat
ccagacagaccatgggaacttcatagcataagcggtgtacataaggatttgattcaagta
ttgcagtggaatgcaagcggtacgcggctgttatccggtgatagctcgggtacctctgta
ttatggcagatgaaggaccatttgttgaatgactgggagagtgttgcggagagtcacgtc
aatggagagcccatcgttgcactgggatggcttcacaatggagtcaaaatttcctacaat
gtggacaatattgactctccaagcatgctggataagtttactcgttcccgattcacaccc
tctttgctacaagtgggaaccaaaccagccgttggatggatagctgtcacctctacaggc
ctggtttctgtgacgattctgaagagcggaggcgggacaagtacatttactgagtgtctc
gggaatacaagatgccatgctgaactagctgacattgcttactcaagctctggtgacatc
ttaatagccacatcggatggcagctgccgaagccccgtccaagtctacaaagttaatctt
agctggagagatgacaaagtatttattgaaacagactacctgccatcccttcatgtacag
tgctgtgtcgatctcaacaacaaagacaaatatttaaccatcacacatctgagatttatc
aacaaggaatgttatgaagaggagagtacatcagtcccagccgagcagctcatcatatca
gccattggctcatcaggttcttgtgtcgagttctggagtttgagtaaagagtttgttccg
ttgaataaaatattccagaccagtccaccaccgtccagggagtcccagccaaccactcag
aaatgggtttttggtacatgctacaccaattcgtctgccgttacgggattgtgtctgccc
aaactaccggtcaaactttccagtaaatctatctacaatggcccagggatggtcatggct
gttgcattccaagatggcagtgtcaagttacttcacagggtgtctttaaaaccatgtgcg
tcattcaagtatgaaggagctaaagtagatacaggatctcaggccaagagacagaaagtt
tacaacggcaagcacctcatgtgtatggagatgtcaagcacttgttgcagtatcatggcg
gtagaccggatgggggccctgtgcctcatcaagattgcaccaacgctgggtcaggcacta
gaccaaggtgccgcgagggcccataccatcgcccaggttgtcaacttgttggagtatagt
ctggtgactggctatgagtggtgggacttacttcatacaatcacaccaggtatggtcgac
actgtgattgaccgtttgactgaagcatttaacagacagtccaagtcaacgcaggaatta
ttattcagtcggttggtagccgtcaaagcctcccttcacagaatgacctccagtggtgcc
ggcaagtcagtggattgttactgtaagcttttactcaacgccatctcatctgagtttaga
tccctcctcagaccgactagcgtcaccgctcaggacaaagggccggctgagaaactcact
gctatttgtgcacatagtacagagttagacttgactaagttgatgctaaacatagacacc
aaggactatgctctggacccaaatttcatccagtccctgcagcagttggtccagtggatc
gcagaatattgcctctacaccttaagcacggttccacagcaagcatctaacccaactaaa
ccagggattagtgtattgagagacacctccactctgtgcttgttacgggagatgctcgta
ctcattaagatatggggaatacgcaagaagacgtgcttgcccgtattttcaacaacgtca
gactcattggatactctgtctcatctctacaaactcatgactcacgtctggctagcgagt
aaggagattccacccgctgaactggacgaaaataccgtcgatgagtgttgtcttttaccg
agccaaatcatgatgcatcccttggatgtcactccagtcacagagggaataactggtaag
ctgctcctcctgcgtcaggctatgagttttcaattcaacactacccctccccacatggtc
aacattgcgacctttggccacagcctaaatatattccccgggtctgaggtcaacgtcagg
tcactctctgacaagattcatcagaagacggatgttgtgcgacggctgtacttgggcgtg
gccccgccagatgagataagaagttgtacaagatgttcgtccatatcaatgcttaactcc
cccactcgaacggtcatcatgaaagcttgggaacaacgctgggccagatcttgcctatgt
gggggactgtggagaagggttgtcatggcttga
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